Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sftpa1P35242 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.45□□□□□ -0.26
Sftpa1P35242 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Sftpa1P35242 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sftpa1P35242 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Sftpa1P35242 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.45□□□□□ -0.26
Sftpa1P35242 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.45□□□□□ -0.26
Sftpa1P35242 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sftpa1P35242 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.45□□□□□ -0.26
Sftpa1P35242 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sftpa1P35242 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.45□□□□□ -0.26
Sftpa1P35242 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.45□□□□□ -0.26
Sftpa1P35242 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.45□□□□□ -0.26
Sftpa1P35242 AY702102-202ENSMUST00000194651 1173 ntBASIC13.45□□□□□ -0.26
Sftpa1P35242 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.45□□□□□ -0.26
Sftpa1P35242 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sftpa1P35242 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.45□□□□□ -0.26
Sftpa1P35242 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.45□□□□□ -0.26
Sftpa1P35242 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.45□□□□□ -0.26
Sftpa1P35242 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sftpa1P35242 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Sftpa1P35242 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sftpa1P35242 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sftpa1P35242 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Sftpa1P35242 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sftpa1P35242 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sftpa1P35242 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sftpa1P35242 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sftpa1P35242 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sftpa1P35242 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sftpa1P35242 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sftpa1P35242 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sftpa1P35242 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sftpa1P35242 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sftpa1P35242 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sftpa1P35242 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sftpa1P35242 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sftpa1P35242 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sftpa1P35242 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sftpa1P35242 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sftpa1P35242 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
Sftpa1P35242 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Sftpa1P35242 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sftpa1P35242 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.44□□□□□ -0.26
Sftpa1P35242 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.44□□□□□ -0.26
Sftpa1P35242 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.44□□□□□ -0.26
Sftpa1P35242 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.44□□□□□ -0.26
Sftpa1P35242 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Sftpa1P35242 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sftpa1P35242 Gm27892-201ENSMUST00000185017 106 ntBASIC13.44□□□□□ -0.26
Sftpa1P35242 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.44□□□□□ -0.26
Sftpa1P35242 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Sftpa1P35242 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sftpa1P35242 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Sftpa1P35242 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sftpa1P35242 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sftpa1P35242 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sftpa1P35242 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Sftpa1P35242 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sftpa1P35242 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sftpa1P35242 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Sftpa1P35242 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sftpa1P35242 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.44□□□□□ -0.26
Sftpa1P35242 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sftpa1P35242 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sftpa1P35242 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sftpa1P35242 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Sftpa1P35242 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sftpa1P35242 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sftpa1P35242 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sftpa1P35242 Gm15678-201ENSMUST00000117573 960 ntBASIC13.43□□□□□ -0.26
Sftpa1P35242 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sftpa1P35242 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sftpa1P35242 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.43□□□□□ -0.26
Sftpa1P35242 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.43□□□□□ -0.26
Sftpa1P35242 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.43□□□□□ -0.26
Sftpa1P35242 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.43□□□□□ -0.26
Sftpa1P35242 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.43□□□□□ -0.26
Sftpa1P35242 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sftpa1P35242 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sftpa1P35242 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Sftpa1P35242 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sftpa1P35242 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sftpa1P35242 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sftpa1P35242 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Sftpa1P35242 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sftpa1P35242 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sftpa1P35242 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sftpa1P35242 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.43□□□□□ -0.26
Sftpa1P35242 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sftpa1P35242 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sftpa1P35242 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sftpa1P35242 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sftpa1P35242 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sftpa1P35242 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sftpa1P35242 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sftpa1P35242 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sftpa1P35242 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sftpa1P35242 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sftpa1P35242 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms