Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rom1P32958 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Rom1P32958 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rom1P32958 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Rom1P32958 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rom1P32958 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rom1P32958 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rom1P32958 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rom1P32958 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rom1P32958 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rom1P32958 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Rom1P32958 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rom1P32958 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rom1P32958 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rom1P32958 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.55□□□□□ -0.56
Rom1P32958 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rom1P32958 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rom1P32958 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Rom1P32958 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rom1P32958 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rom1P32958 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rom1P32958 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rom1P32958 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rom1P32958 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Rom1P32958 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Rom1P32958 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC11.55□□□□□ -0.56
Rom1P32958 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rom1P32958 Gm6433-201ENSMUST00000118634 875 ntBASIC11.55□□□□□ -0.56
Rom1P32958 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Rom1P32958 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rom1P32958 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC11.55□□□□□ -0.56
Rom1P32958 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rom1P32958 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rom1P32958 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rom1P32958 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rom1P32958 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC11.55□□□□□ -0.56
Rom1P32958 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Rom1P32958 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Rom1P32958 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rom1P32958 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rom1P32958 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rom1P32958 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rom1P32958 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC11.55□□□□□ -0.56
Rom1P32958 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rom1P32958 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Rom1P32958 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rom1P32958 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Rom1P32958 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rom1P32958 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rom1P32958 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rom1P32958 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Rom1P32958 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rom1P32958 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rom1P32958 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rom1P32958 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rom1P32958 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rom1P32958 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rom1P32958 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rom1P32958 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rom1P32958 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rom1P32958 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rom1P32958 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rom1P32958 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC11.54□□□□□ -0.56
Rom1P32958 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rom1P32958 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Rom1P32958 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rom1P32958 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rom1P32958 Gm14042-201ENSMUST00000120139 833 ntBASIC11.54□□□□□ -0.56
Rom1P32958 Gm25016-201ENSMUST00000158399 131 ntBASIC11.54□□□□□ -0.56
Rom1P32958 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Rom1P32958 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC11.54□□□□□ -0.56
Rom1P32958 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
Rom1P32958 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC11.54□□□□□ -0.56
Rom1P32958 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
Rom1P32958 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rom1P32958 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rom1P32958 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rom1P32958 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Rom1P32958 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Rom1P32958 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rom1P32958 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.54□□□□□ -0.56
Rom1P32958 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rom1P32958 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.54□□□□□ -0.56
Rom1P32958 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.54□□□□□ -0.56
Rom1P32958 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rom1P32958 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rom1P32958 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rom1P32958 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rom1P32958 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.54□□□□□ -0.56
Rom1P32958 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Rom1P32958 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Rom1P32958 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rom1P32958 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rom1P32958 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Rom1P32958 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rom1P32958 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Rom1P32958 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rom1P32958 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rom1P32958 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rom1P32958 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms