Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
BdnfP21237 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
BdnfP21237 Gm7222-201ENSMUST00000117512 906 ntBASIC14.02□□□□□ -0.17
BdnfP21237 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.02□□□□□ -0.17
BdnfP21237 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BdnfP21237 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.02□□□□□ -0.17
BdnfP21237 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.02□□□□□ -0.17
BdnfP21237 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.02□□□□□ -0.17
BdnfP21237 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BdnfP21237 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BdnfP21237 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
BdnfP21237 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BdnfP21237 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.02□□□□□ -0.17
BdnfP21237 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.01□□□□□ -0.17
BdnfP21237 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
BdnfP21237 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
BdnfP21237 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
BdnfP21237 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BdnfP21237 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.01□□□□□ -0.17
BdnfP21237 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BdnfP21237 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BdnfP21237 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.01□□□□□ -0.17
BdnfP21237 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BdnfP21237 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
BdnfP21237 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BdnfP21237 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BdnfP21237 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BdnfP21237 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BdnfP21237 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
BdnfP21237 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
BdnfP21237 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BdnfP21237 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.01□□□□□ -0.17
BdnfP21237 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BdnfP21237 Gm7862-201ENSMUST00000121461 292 ntBASIC14.01□□□□□ -0.17
BdnfP21237 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BdnfP21237 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BdnfP21237 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.01□□□□□ -0.17
BdnfP21237 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BdnfP21237 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
BdnfP21237 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BdnfP21237 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BdnfP21237 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BdnfP21237 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BdnfP21237 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BdnfP21237 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.01□□□□□ -0.17
BdnfP21237 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BdnfP21237 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BdnfP21237 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BdnfP21237 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BdnfP21237 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BdnfP21237 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BdnfP21237 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BdnfP21237 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
BdnfP21237 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BdnfP21237 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
BdnfP21237 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC14□□□□□ -0.17
BdnfP21237 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14□□□□□ -0.17
BdnfP21237 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14□□□□□ -0.17
BdnfP21237 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BdnfP21237 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
BdnfP21237 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
BdnfP21237 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BdnfP21237 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BdnfP21237 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14□□□□□ -0.17
BdnfP21237 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
BdnfP21237 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14□□□□□ -0.17
BdnfP21237 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BdnfP21237 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
BdnfP21237 Gm7230-201ENSMUST00000173026 815 ntBASIC14□□□□□ -0.17
BdnfP21237 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14□□□□□ -0.17
BdnfP21237 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14□□□□□ -0.17
BdnfP21237 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
BdnfP21237 Gm45167-201ENSMUST00000208007 322 ntBASIC14□□□□□ -0.17
BdnfP21237 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14□□□□□ -0.17
BdnfP21237 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BdnfP21237 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
BdnfP21237 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BdnfP21237 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BdnfP21237 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BdnfP21237 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14□□□□□ -0.17
BdnfP21237 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BdnfP21237 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BdnfP21237 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
BdnfP21237 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BdnfP21237 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14□□□□□ -0.17
BdnfP21237 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BdnfP21237 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
BdnfP21237 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BdnfP21237 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BdnfP21237 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
BdnfP21237 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
BdnfP21237 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BdnfP21237 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BdnfP21237 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
BdnfP21237 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
BdnfP21237 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
BdnfP21237 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
BdnfP21237 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
BdnfP21237 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
BdnfP21237 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms