Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf9P20334 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf9P20334 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf9P20334 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf9P20334 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf9P20334 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf9P20334 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Tnfrsf9P20334 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf9P20334 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf9P20334 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf9P20334 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12□□□□□ -0.49
Tnfrsf9P20334 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf9P20334 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Tnfrsf9P20334 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Gm38058-201ENSMUST00000194323 4368 ntBASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC11.99□□□□□ -0.49
Tnfrsf9P20334 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf9P20334 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Tnfrsf9P20334 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Thap2-203ENSMUST00000218989 527 ntBASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Gpr146-202ENSMUST00000053120 1040 ntBASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Gm13294-201ENSMUST00000121757 1330 ntBASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Gm44616-201ENSMUST00000206417 1732 ntBASIC11.99□□□□□ -0.49
Tnfrsf9P20334 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf9P20334 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Gm10676-201ENSMUST00000098778 3221 ntBASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf9P20334 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf9P20334 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Tnfrsf9P20334 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Tnfrsf9P20334 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Tnfrsf9P20334 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Tnfrsf9P20334 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf9P20334 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf9P20334 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf9P20334 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf9P20334 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf9P20334 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf9P20334 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf9P20334 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf9P20334 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Tnfrsf9P20334 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC11.98□□□□□ -0.49
Tnfrsf9P20334 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC11.98□□□□□ -0.49
Tnfrsf9P20334 CT025626.1-201ENSMUST00000223735 1455 ntBASIC11.98□□□□□ -0.49
Tnfrsf9P20334 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC11.98□□□□□ -0.49
Tnfrsf9P20334 AC154767.3-201ENSMUST00000225150 1342 ntBASIC11.98□□□□□ -0.49
Tnfrsf9P20334 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf9P20334 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf9P20334 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.98□□□□□ -0.49
Tnfrsf9P20334 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.98□□□□□ -0.49
Tnfrsf9P20334 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC11.98□□□□□ -0.49
Tnfrsf9P20334 AC126408.1-201ENSMUST00000225184 523 ntBASIC11.98□□□□□ -0.49
Tnfrsf9P20334 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf9P20334 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Tnfrsf9P20334 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf9P20334 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf9P20334 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf9P20334 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf9P20334 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf9P20334 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf9P20334 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf9P20334 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf9P20334 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf9P20334 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf9P20334 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms