Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msx1P13297 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msx1P13297 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Msx1P13297 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msx1P13297 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msx1P13297 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msx1P13297 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Msx1P13297 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Msx1P13297 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msx1P13297 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msx1P13297 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msx1P13297 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msx1P13297 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Msx1P13297 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx1P13297 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx1P13297 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx1P13297 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Msx1P13297 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx1P13297 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Msx1P13297 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx1P13297 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx1P13297 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Msx1P13297 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx1P13297 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Msx1P13297 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.87□□□□□ -0.19
Msx1P13297 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Msx1P13297 Gm13223-201ENSMUST00000118609 747 ntBASIC13.87□□□□□ -0.19
Msx1P13297 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx1P13297 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx1P13297 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Msx1P13297 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.87□□□□□ -0.19
Msx1P13297 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Msx1P13297 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC13.87□□□□□ -0.19
Msx1P13297 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.87□□□□□ -0.19
Msx1P13297 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.87□□□□□ -0.19
Msx1P13297 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx1P13297 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Msx1P13297 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Msx1P13297 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx1P13297 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx1P13297 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx1P13297 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.87□□□□□ -0.19
Msx1P13297 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Msx1P13297 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx1P13297 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Msx1P13297 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx1P13297 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.87□□□□□ -0.19
Msx1P13297 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Msx1P13297 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx1P13297 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx1P13297 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx1P13297 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx1P13297 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx1P13297 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx1P13297 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx1P13297 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx1P13297 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Msx1P13297 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx1P13297 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx1P13297 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.86□□□□□ -0.19
Msx1P13297 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx1P13297 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Msx1P13297 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx1P13297 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Msx1P13297 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx1P13297 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.86□□□□□ -0.19
Msx1P13297 Gm15693-201ENSMUST00000120470 637 ntBASIC13.86□□□□□ -0.19
Msx1P13297 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Msx1P13297 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Msx1P13297 Mir8102-201ENSMUST00000184148 139 ntBASIC13.86□□□□□ -0.19
Msx1P13297 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Msx1P13297 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.86□□□□□ -0.19
Msx1P13297 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.86□□□□□ -0.19
Msx1P13297 Gm37720-201ENSMUST00000195497 1241 ntBASIC13.86□□□□□ -0.19
Msx1P13297 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx1P13297 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC13.86□□□□□ -0.19
Msx1P13297 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx1P13297 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx1P13297 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Msx1P13297 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx1P13297 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.86□□□□□ -0.19
Msx1P13297 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Msx1P13297 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx1P13297 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx1P13297 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Msx1P13297 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx1P13297 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx1P13297 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Msx1P13297 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Msx1P13297 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx1P13297 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx1P13297 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx1P13297 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Msx1P13297 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Msx1P13297 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Msx1P13297 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Msx1P13297 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Msx1P13297 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Msx1P13297 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Msx1P13297 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms