Protein–RNA interactions for Protein: P08553

Nefm, Neurofilament medium polypeptide, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NefmP08553 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC21.58■■□□□ 1.05
NefmP08553 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
NefmP08553 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC21.58■■□□□ 1.05
NefmP08553 Gm6550-201ENSMUST00000187574 993 ntBASIC21.58■■□□□ 1.05
NefmP08553 Gm43347-201ENSMUST00000200226 580 ntBASIC21.58■■□□□ 1.05
NefmP08553 Olfr286-202ENSMUST00000205305 969 ntBASIC21.58■■□□□ 1.05
NefmP08553 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NefmP08553 AC158538.1-201ENSMUST00000225870 294 ntBASIC21.58■■□□□ 1.05
NefmP08553 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NefmP08553 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NefmP08553 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NefmP08553 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NefmP08553 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
NefmP08553 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NefmP08553 Gm45630-201ENSMUST00000210243 1911 ntBASIC21.58■■□□□ 1.04
NefmP08553 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NefmP08553 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
NefmP08553 Gm43056-201ENSMUST00000197865 2791 ntBASIC21.58■■□□□ 1.04
NefmP08553 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NefmP08553 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NefmP08553 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NefmP08553 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NefmP08553 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NefmP08553 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
NefmP08553 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NefmP08553 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NefmP08553 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NefmP08553 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NefmP08553 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NefmP08553 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NefmP08553 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NefmP08553 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
NefmP08553 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NefmP08553 Ank2-226ENSMUST00000189368 339 ntBASIC21.57■■□□□ 1.04
NefmP08553 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
NefmP08553 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC21.57■■□□□ 1.04
NefmP08553 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
NefmP08553 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NefmP08553 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NefmP08553 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
NefmP08553 Gm38391-201ENSMUST00000191720 4069 ntBASIC21.57■■□□□ 1.04
NefmP08553 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
NefmP08553 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
NefmP08553 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC21.57■■□□□ 1.04
NefmP08553 Tcf21-202ENSMUST00000218002 1788 ntBASIC21.56■■□□□ 1.04
NefmP08553 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
NefmP08553 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NefmP08553 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NefmP08553 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
NefmP08553 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NefmP08553 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NefmP08553 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NefmP08553 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
NefmP08553 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NefmP08553 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
NefmP08553 Gm4691-201ENSMUST00000182339 1000 ntBASIC21.56■■□□□ 1.04
NefmP08553 Gm28033-201ENSMUST00000184224 96 ntBASIC21.56■■□□□ 1.04
NefmP08553 Gm27459-201ENSMUST00000184860 107 ntBASIC21.56■■□□□ 1.04
NefmP08553 Gm2451-201ENSMUST00000199447 999 ntBASIC21.56■■□□□ 1.04
NefmP08553 Gm10290-201ENSMUST00000200451 999 ntBASIC21.56■■□□□ 1.04
NefmP08553 Gm34391-201ENSMUST00000203706 907 ntBASIC21.56■■□□□ 1.04
NefmP08553 Gm6376-201ENSMUST00000209407 580 ntBASIC21.56■■□□□ 1.04
NefmP08553 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NefmP08553 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC21.56■■□□□ 1.04
NefmP08553 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NefmP08553 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
NefmP08553 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NefmP08553 Gm38042-201ENSMUST00000191614 5208 ntBASIC21.56■■□□□ 1.04
NefmP08553 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NefmP08553 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
NefmP08553 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
NefmP08553 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NefmP08553 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC21.55■■□□□ 1.04
NefmP08553 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
NefmP08553 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC21.55■■□□□ 1.04
NefmP08553 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NefmP08553 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NefmP08553 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC21.55■■□□□ 1.04
NefmP08553 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
NefmP08553 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC21.55■■□□□ 1.04
NefmP08553 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NefmP08553 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
NefmP08553 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC21.55■■□□□ 1.04
NefmP08553 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NefmP08553 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NefmP08553 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NefmP08553 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC21.55■■□□□ 1.04
NefmP08553 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NefmP08553 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NefmP08553 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NefmP08553 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
NefmP08553 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NefmP08553 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
NefmP08553 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NefmP08553 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
NefmP08553 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NefmP08553 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
NefmP08553 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
NefmP08553 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NefmP08553 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC21.54■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms