Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ClppO88696 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClppO88696 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
ClppO88696 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClppO88696 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
ClppO88696 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClppO88696 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.29□□□□□ -0.12
ClppO88696 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
ClppO88696 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
ClppO88696 Gm43474-201ENSMUST00000196415 774 ntBASIC14.29□□□□□ -0.12
ClppO88696 Gm43125-201ENSMUST00000201724 730 ntBASIC14.29□□□□□ -0.12
ClppO88696 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.29□□□□□ -0.12
ClppO88696 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.29□□□□□ -0.12
ClppO88696 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ClppO88696 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClppO88696 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
ClppO88696 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClppO88696 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
ClppO88696 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClppO88696 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClppO88696 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClppO88696 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
ClppO88696 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.29□□□□□ -0.12
ClppO88696 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClppO88696 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClppO88696 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClppO88696 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.29□□□□□ -0.12
ClppO88696 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
ClppO88696 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ClppO88696 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClppO88696 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClppO88696 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClppO88696 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
ClppO88696 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
ClppO88696 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClppO88696 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClppO88696 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.28□□□□□ -0.12
ClppO88696 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClppO88696 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClppO88696 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClppO88696 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
ClppO88696 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClppO88696 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClppO88696 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.28□□□□□ -0.12
ClppO88696 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.28□□□□□ -0.12
ClppO88696 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.28□□□□□ -0.12
ClppO88696 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
ClppO88696 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.28□□□□□ -0.12
ClppO88696 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.28□□□□□ -0.12
ClppO88696 Sybu-209ENSMUST00000228639 4113 ntBASIC14.28□□□□□ -0.12
ClppO88696 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClppO88696 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClppO88696 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClppO88696 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClppO88696 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClppO88696 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ClppO88696 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClppO88696 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClppO88696 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClppO88696 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
ClppO88696 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClppO88696 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClppO88696 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
ClppO88696 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClppO88696 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClppO88696 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
ClppO88696 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ClppO88696 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
ClppO88696 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ClppO88696 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ClppO88696 Gm37105-201ENSMUST00000192251 2085 ntBASIC14.27□□□□□ -0.12
ClppO88696 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ClppO88696 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.27□□□□□ -0.12
ClppO88696 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ClppO88696 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ClppO88696 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
ClppO88696 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.27□□□□□ -0.12
ClppO88696 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
ClppO88696 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.27□□□□□ -0.12
ClppO88696 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
ClppO88696 Gm22065-201ENSMUST00000103753 110 ntBASIC14.27□□□□□ -0.13
ClppO88696 Gm22066-201ENSMUST00000103761 110 ntBASIC14.27□□□□□ -0.13
ClppO88696 Gm24932-201ENSMUST00000103763 110 ntBASIC14.27□□□□□ -0.13
ClppO88696 Gm24115-201ENSMUST00000103799 110 ntBASIC14.27□□□□□ -0.13
ClppO88696 Gm22190-201ENSMUST00000103827 110 ntBASIC14.27□□□□□ -0.13
ClppO88696 Gm22191-201ENSMUST00000103831 110 ntBASIC14.27□□□□□ -0.13
ClppO88696 Gm24721-201ENSMUST00000103849 110 ntBASIC14.27□□□□□ -0.13
ClppO88696 Gm28018-201ENSMUST00000103869 110 ntBASIC14.27□□□□□ -0.13
ClppO88696 Gm26399-201ENSMUST00000103937 110 ntBASIC14.27□□□□□ -0.13
ClppO88696 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
ClppO88696 Gm9385-201ENSMUST00000117563 472 ntBASIC14.27□□□□□ -0.13
ClppO88696 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ClppO88696 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.27□□□□□ -0.13
ClppO88696 Gm25349-201ENSMUST00000177728 110 ntBASIC14.27□□□□□ -0.13
ClppO88696 Gm23616-201ENSMUST00000177797 110 ntBASIC14.27□□□□□ -0.13
ClppO88696 Gm25871-201ENSMUST00000177816 110 ntBASIC14.27□□□□□ -0.13
ClppO88696 Gm24752-201ENSMUST00000178240 110 ntBASIC14.27□□□□□ -0.13
ClppO88696 Gm24496-201ENSMUST00000178287 110 ntBASIC14.27□□□□□ -0.13
ClppO88696 Gm25649-201ENSMUST00000178476 110 ntBASIC14.27□□□□□ -0.13
ClppO88696 Gm25548-201ENSMUST00000178681 110 ntBASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms