Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim3O70209 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim3O70209 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim3O70209 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim3O70209 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim3O70209 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Pdlim3O70209 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.25□□□□□ -0.29
Pdlim3O70209 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.25□□□□□ -0.29
Pdlim3O70209 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim3O70209 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pdlim3O70209 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim3O70209 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim3O70209 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim3O70209 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim3O70209 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim3O70209 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim3O70209 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.24□□□□□ -0.29
Pdlim3O70209 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim3O70209 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim3O70209 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.24□□□□□ -0.29
Pdlim3O70209 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Pdlim3O70209 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.24□□□□□ -0.29
Pdlim3O70209 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Pdlim3O70209 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim3O70209 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim3O70209 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim3O70209 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim3O70209 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim3O70209 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim3O70209 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Pdlim3O70209 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.24□□□□□ -0.29
Pdlim3O70209 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim3O70209 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim3O70209 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim3O70209 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim3O70209 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim3O70209 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim3O70209 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim3O70209 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Pdlim3O70209 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim3O70209 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim3O70209 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.24□□□□□ -0.29
Pdlim3O70209 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim3O70209 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.24□□□□□ -0.29
Pdlim3O70209 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Pdlim3O70209 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Pdlim3O70209 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.24□□□□□ -0.29
Pdlim3O70209 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim3O70209 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim3O70209 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim3O70209 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim3O70209 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Pdlim3O70209 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim3O70209 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim3O70209 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim3O70209 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim3O70209 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim3O70209 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim3O70209 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim3O70209 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim3O70209 Gm13418-201ENSMUST00000119097 944 ntBASIC13.23□□□□□ -0.29
Pdlim3O70209 Gm13836-201ENSMUST00000121159 501 ntBASIC13.23□□□□□ -0.29
Pdlim3O70209 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.23□□□□□ -0.29
Pdlim3O70209 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim3O70209 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim3O70209 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Pdlim3O70209 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.23□□□□□ -0.29
Pdlim3O70209 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.23□□□□□ -0.29
Pdlim3O70209 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim3O70209 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim3O70209 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim3O70209 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim3O70209 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Pdlim3O70209 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Pdlim3O70209 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim3O70209 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Pdlim3O70209 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.23□□□□□ -0.29
Pdlim3O70209 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim3O70209 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim3O70209 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim3O70209 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim3O70209 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim3O70209 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim3O70209 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim3O70209 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Pdlim3O70209 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim3O70209 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim3O70209 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.23□□□□□ -0.29
Pdlim3O70209 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim3O70209 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim3O70209 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim3O70209 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim3O70209 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Pdlim3O70209 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.22□□□□□ -0.29
Pdlim3O70209 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim3O70209 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Pdlim3O70209 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim3O70209 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim3O70209 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim3O70209 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms