Protein–RNA interactions for Protein: O54949

Nlk, Serine/threonine-protein kinase NLK, mousemouse

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NlkO54949 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.1□□□□□ -0.31
NlkO54949 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NlkO54949 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NlkO54949 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NlkO54949 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NlkO54949 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NlkO54949 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NlkO54949 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
NlkO54949 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NlkO54949 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NlkO54949 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NlkO54949 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NlkO54949 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
NlkO54949 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
NlkO54949 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
NlkO54949 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
NlkO54949 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NlkO54949 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NlkO54949 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NlkO54949 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
NlkO54949 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NlkO54949 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NlkO54949 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NlkO54949 Gm8097-201ENSMUST00000117903 829 ntBASIC13.09□□□□□ -0.31
NlkO54949 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NlkO54949 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC13.09□□□□□ -0.31
NlkO54949 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NlkO54949 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.09□□□□□ -0.31
NlkO54949 Gm43347-201ENSMUST00000200226 580 ntBASIC13.09□□□□□ -0.31
NlkO54949 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
NlkO54949 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.09□□□□□ -0.31
NlkO54949 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NlkO54949 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NlkO54949 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NlkO54949 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NlkO54949 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NlkO54949 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NlkO54949 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NlkO54949 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.09□□□□□ -0.31
NlkO54949 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NlkO54949 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
NlkO54949 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NlkO54949 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.09□□□□□ -0.31
NlkO54949 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.09□□□□□ -0.31
NlkO54949 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NlkO54949 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
NlkO54949 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NlkO54949 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NlkO54949 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NlkO54949 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NlkO54949 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
NlkO54949 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.08□□□□□ -0.32
NlkO54949 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.08□□□□□ -0.32
NlkO54949 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
NlkO54949 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
NlkO54949 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
NlkO54949 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NlkO54949 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NlkO54949 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
NlkO54949 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NlkO54949 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.08□□□□□ -0.32
NlkO54949 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
NlkO54949 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.08□□□□□ -0.32
NlkO54949 Gm8344-201ENSMUST00000119813 856 ntBASIC13.08□□□□□ -0.32
NlkO54949 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC13.08□□□□□ -0.32
NlkO54949 Gm34391-201ENSMUST00000203706 907 ntBASIC13.08□□□□□ -0.32
NlkO54949 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.08□□□□□ -0.32
NlkO54949 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.08□□□□□ -0.32
NlkO54949 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
NlkO54949 Birc2-201ENSMUST00000054878 378 ntBASIC13.08□□□□□ -0.32
NlkO54949 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NlkO54949 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NlkO54949 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NlkO54949 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NlkO54949 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NlkO54949 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NlkO54949 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NlkO54949 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NlkO54949 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NlkO54949 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NlkO54949 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NlkO54949 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
NlkO54949 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NlkO54949 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NlkO54949 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.08□□□□□ -0.32
NlkO54949 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
NlkO54949 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NlkO54949 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NlkO54949 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NlkO54949 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NlkO54949 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NlkO54949 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
NlkO54949 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NlkO54949 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
NlkO54949 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
NlkO54949 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NlkO54949 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NlkO54949 Gm24589-201ENSMUST00000116692 94 ntBASIC13.07□□□□□ -0.32
NlkO54949 Gm17971-201ENSMUST00000190239 806 ntBASIC13.07□□□□□ -0.32
NlkO54949 Gm19164-201ENSMUST00000210667 640 ntBASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms