Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dkk1O54908 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Dkk1O54908 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Dkk1O54908 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dkk1O54908 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Dkk1O54908 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Dkk1O54908 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Dkk1O54908 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dkk1O54908 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dkk1O54908 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dkk1O54908 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dkk1O54908 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Dkk1O54908 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Dkk1O54908 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Dkk1O54908 Gm13844-201ENSMUST00000134541 581 ntTSL 3 BASIC13.15□□□□□ -0.3
Dkk1O54908 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Dkk1O54908 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dkk1O54908 Gm7609-203ENSMUST00000160058 1142 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Dkk1O54908 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dkk1O54908 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dkk1O54908 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Dkk1O54908 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC13.15□□□□□ -0.3
Dkk1O54908 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.15□□□□□ -0.3
Dkk1O54908 Gm45167-201ENSMUST00000208007 322 ntBASIC13.15□□□□□ -0.3
Dkk1O54908 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC13.15□□□□□ -0.3
Dkk1O54908 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.15□□□□□ -0.3
Dkk1O54908 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Dkk1O54908 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Dkk1O54908 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Dkk1O54908 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Dkk1O54908 AC154562.1-201ENSMUST00000226140 966 ntBASIC13.15□□□□□ -0.3
Dkk1O54908 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dkk1O54908 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dkk1O54908 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dkk1O54908 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Dkk1O54908 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dkk1O54908 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dkk1O54908 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Dkk1O54908 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC13.15□□□□□ -0.3
Dkk1O54908 Gm7647-201ENSMUST00000200996 1389 ntBASIC13.15□□□□□ -0.3
Dkk1O54908 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dkk1O54908 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dkk1O54908 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dkk1O54908 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Dkk1O54908 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Dkk1O54908 5830473C10Rik-202ENSMUST00000200765 1691 ntTSL 5 BASIC13.15□□□□□ -0.31
Dkk1O54908 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Dkk1O54908 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Dkk1O54908 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Dkk1O54908 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Dkk1O54908 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.14□□□□□ -0.31
Dkk1O54908 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Dkk1O54908 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.14□□□□□ -0.31
Dkk1O54908 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Dkk1O54908 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.14□□□□□ -0.31
Dkk1O54908 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Dkk1O54908 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Dkk1O54908 Gm5392-201ENSMUST00000122189 789 ntBASIC13.14□□□□□ -0.31
Dkk1O54908 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Dkk1O54908 Gm11266-201ENSMUST00000139835 1271 ntTSL 2 BASIC13.14□□□□□ -0.31
Dkk1O54908 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Dkk1O54908 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Dkk1O54908 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Dkk1O54908 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Dkk1O54908 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Dkk1O54908 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Dkk1O54908 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Dkk1O54908 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Dkk1O54908 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.14□□□□□ -0.31
Dkk1O54908 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Dkk1O54908 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.14□□□□□ -0.31
Dkk1O54908 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Dkk1O54908 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC13.14□□□□□ -0.31
Dkk1O54908 Gm18150-201ENSMUST00000195341 645 ntBASIC13.14□□□□□ -0.31
Dkk1O54908 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC13.14□□□□□ -0.31
Dkk1O54908 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.14□□□□□ -0.31
Dkk1O54908 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.14□□□□□ -0.31
Dkk1O54908 Gm44422-201ENSMUST00000204142 1025 ntBASIC13.14□□□□□ -0.31
Dkk1O54908 Gm7344-201ENSMUST00000212122 1222 ntBASIC13.14□□□□□ -0.31
Dkk1O54908 Olfr692-202ENSMUST00000217827 1126 ntBASIC13.14□□□□□ -0.31
Dkk1O54908 AC109214.2-201ENSMUST00000220089 358 ntBASIC13.14□□□□□ -0.31
Dkk1O54908 AC154361.1-201ENSMUST00000225694 745 ntBASIC13.14□□□□□ -0.31
Dkk1O54908 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Dkk1O54908 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Dkk1O54908 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC13.14□□□□□ -0.31
Dkk1O54908 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Dkk1O54908 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Dkk1O54908 Klri1-201ENSMUST00000088046 838 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Dkk1O54908 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Dkk1O54908 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Dkk1O54908 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC13.14□□□□□ -0.31
Dkk1O54908 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC13.14□□□□□ -0.31
Dkk1O54908 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Dkk1O54908 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Dkk1O54908 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Dkk1O54908 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Dkk1O54908 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Dkk1O54908 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Dkk1O54908 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Dkk1O54908 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms