Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
DffbO54788 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
DffbO54788 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
DffbO54788 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.57□□□□□ -0.4
DffbO54788 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
DffbO54788 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
DffbO54788 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
DffbO54788 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
DffbO54788 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
DffbO54788 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
DffbO54788 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
DffbO54788 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
DffbO54788 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC12.57□□□□□ -0.4
DffbO54788 Gm6089-201ENSMUST00000197666 938 ntBASIC12.57□□□□□ -0.4
DffbO54788 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
DffbO54788 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
DffbO54788 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
DffbO54788 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
DffbO54788 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
DffbO54788 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
DffbO54788 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
DffbO54788 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
DffbO54788 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
DffbO54788 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
DffbO54788 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
DffbO54788 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
DffbO54788 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.57□□□□□ -0.4
DffbO54788 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
DffbO54788 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
DffbO54788 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
DffbO54788 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
DffbO54788 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
DffbO54788 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
DffbO54788 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
DffbO54788 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.56□□□□□ -0.4
DffbO54788 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
DffbO54788 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
DffbO54788 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
DffbO54788 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
DffbO54788 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
DffbO54788 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.56□□□□□ -0.4
DffbO54788 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
DffbO54788 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
DffbO54788 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC12.56□□□□□ -0.4
DffbO54788 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
DffbO54788 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
DffbO54788 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
DffbO54788 Gm37153-201ENSMUST00000193637 231 ntBASIC12.56□□□□□ -0.4
DffbO54788 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
DffbO54788 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
DffbO54788 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.56□□□□□ -0.4
DffbO54788 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.56□□□□□ -0.4
DffbO54788 AC154757.1-201ENSMUST00000228289 336 ntBASIC12.56□□□□□ -0.4
DffbO54788 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
DffbO54788 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
DffbO54788 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
DffbO54788 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
DffbO54788 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
DffbO54788 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
DffbO54788 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
DffbO54788 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
DffbO54788 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
DffbO54788 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
DffbO54788 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
DffbO54788 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.56□□□□□ -0.4
DffbO54788 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
DffbO54788 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
DffbO54788 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
DffbO54788 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
DffbO54788 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
DffbO54788 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
DffbO54788 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
DffbO54788 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DffbO54788 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
DffbO54788 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DffbO54788 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
DffbO54788 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
DffbO54788 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DffbO54788 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.55□□□□□ -0.4
DffbO54788 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.55□□□□□ -0.4
DffbO54788 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
DffbO54788 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
DffbO54788 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
DffbO54788 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DffbO54788 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.55□□□□□ -0.4
DffbO54788 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC12.55□□□□□ -0.4
DffbO54788 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.55□□□□□ -0.4
DffbO54788 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.55□□□□□ -0.4
DffbO54788 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
DffbO54788 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
DffbO54788 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DffbO54788 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DffbO54788 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
DffbO54788 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
DffbO54788 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DffbO54788 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
DffbO54788 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
DffbO54788 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.55□□□□□ -0.4
DffbO54788 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
DffbO54788 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms