Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc188F6WEU2 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc188F6WEU2 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc188F6WEU2 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc188F6WEU2 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc188F6WEU2 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc188F6WEU2 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.6□□□□□ -0.07
Ccdc188F6WEU2 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc188F6WEU2 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc188F6WEU2 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Ccdc188F6WEU2 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc188F6WEU2 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc188F6WEU2 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc188F6WEU2 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc188F6WEU2 Gm11628-201ENSMUST00000117568 171 ntBASIC14.6□□□□□ -0.07
Ccdc188F6WEU2 Gm2991-201ENSMUST00000173338 480 ntBASIC14.6□□□□□ -0.07
Ccdc188F6WEU2 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.6□□□□□ -0.07
Ccdc188F6WEU2 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC14.6□□□□□ -0.07
Ccdc188F6WEU2 Gm38158-201ENSMUST00000194617 339 ntBASIC14.6□□□□□ -0.07
Ccdc188F6WEU2 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.6□□□□□ -0.07
Ccdc188F6WEU2 Gm3222-201ENSMUST00000071282 990 ntBASIC14.6□□□□□ -0.07
Ccdc188F6WEU2 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc188F6WEU2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc188F6WEU2 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc188F6WEU2 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc188F6WEU2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc188F6WEU2 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc188F6WEU2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.6□□□□□ -0.07
Ccdc188F6WEU2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc188F6WEU2 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc188F6WEU2 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc188F6WEU2 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.6□□□□□ -0.07
Ccdc188F6WEU2 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccdc188F6WEU2 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc188F6WEU2 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC14.59□□□□□ -0.07
Ccdc188F6WEU2 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc188F6WEU2 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc188F6WEU2 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc188F6WEU2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.59□□□□□ -0.07
Ccdc188F6WEU2 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc188F6WEU2 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Ccdc188F6WEU2 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc188F6WEU2 Gm10608-202ENSMUST00000213924 676 ntBASIC14.59□□□□□ -0.07
Ccdc188F6WEU2 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC14.59□□□□□ -0.07
Ccdc188F6WEU2 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc188F6WEU2 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Ccdc188F6WEU2 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc188F6WEU2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc188F6WEU2 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc188F6WEU2 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc188F6WEU2 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.59□□□□□ -0.07
Ccdc188F6WEU2 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc188F6WEU2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Ccdc188F6WEU2 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Ccdc188F6WEU2 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc188F6WEU2 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.59□□□□□ -0.07
Ccdc188F6WEU2 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc188F6WEU2 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccdc188F6WEU2 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ccdc188F6WEU2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ccdc188F6WEU2 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ccdc188F6WEU2 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ccdc188F6WEU2 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ccdc188F6WEU2 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Ccdc188F6WEU2 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc188F6WEU2 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc188F6WEU2 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Ccdc188F6WEU2 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc188F6WEU2 Gm14381-201ENSMUST00000122105 414 ntBASIC14.58□□□□□ -0.08
Ccdc188F6WEU2 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.58□□□□□ -0.08
Ccdc188F6WEU2 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc188F6WEU2 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC14.58□□□□□ -0.08
Ccdc188F6WEU2 Gm29396-201ENSMUST00000185659 716 ntBASIC14.58□□□□□ -0.08
Ccdc188F6WEU2 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc188F6WEU2 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Ccdc188F6WEU2 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC14.58□□□□□ -0.08
Ccdc188F6WEU2 CT009718.3-201ENSMUST00000221116 367 ntBASIC14.58□□□□□ -0.08
Ccdc188F6WEU2 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc188F6WEU2 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Ccdc188F6WEU2 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc188F6WEU2 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
Ccdc188F6WEU2 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Ccdc188F6WEU2 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc188F6WEU2 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Ccdc188F6WEU2 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.58□□□□□ -0.08
Ccdc188F6WEU2 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc188F6WEU2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc188F6WEU2 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc188F6WEU2 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.58□□□□□ -0.08
Ccdc188F6WEU2 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc188F6WEU2 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.58□□□□□ -0.08
Ccdc188F6WEU2 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Ccdc188F6WEU2 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc188F6WEU2 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Ccdc188F6WEU2 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Ccdc188F6WEU2 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc188F6WEU2 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc188F6WEU2 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Ccdc188F6WEU2 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc188F6WEU2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms