Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb9E9Q5G2 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb9E9Q5G2 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.16■□□□□ 0.34
Pcdhb9E9Q5G2 Auts2-212ENSMUST00000178555 309 ntBASIC17.16■□□□□ 0.34
Pcdhb9E9Q5G2 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC17.16■□□□□ 0.34
Pcdhb9E9Q5G2 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Pcdhb9E9Q5G2 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.16■□□□□ 0.34
Pcdhb9E9Q5G2 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhb9E9Q5G2 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb9E9Q5G2 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb9E9Q5G2 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb9E9Q5G2 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb9E9Q5G2 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb9E9Q5G2 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb9E9Q5G2 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb9E9Q5G2 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb9E9Q5G2 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb9E9Q5G2 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Pcdhb9E9Q5G2 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb9E9Q5G2 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhb9E9Q5G2 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb9E9Q5G2 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.15■□□□□ 0.34
Pcdhb9E9Q5G2 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Pcdhb9E9Q5G2 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhb9E9Q5G2 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdhb9E9Q5G2 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb9E9Q5G2 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb9E9Q5G2 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb9E9Q5G2 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Pcdhb9E9Q5G2 Gm27631-201ENSMUST00000184163 466 ntBASIC17.15■□□□□ 0.34
Pcdhb9E9Q5G2 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC17.15■□□□□ 0.34
Pcdhb9E9Q5G2 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC17.15■□□□□ 0.34
Pcdhb9E9Q5G2 AC159114.1-201ENSMUST00000220349 266 ntBASIC17.15■□□□□ 0.34
Pcdhb9E9Q5G2 AC126408.1-201ENSMUST00000225184 523 ntBASIC17.15■□□□□ 0.34
Pcdhb9E9Q5G2 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb9E9Q5G2 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhb9E9Q5G2 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb9E9Q5G2 Gm14451-201ENSMUST00000121581 1542 ntBASIC17.15■□□□□ 0.34
Pcdhb9E9Q5G2 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Pcdhb9E9Q5G2 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb9E9Q5G2 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pcdhb9E9Q5G2 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pcdhb9E9Q5G2 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pcdhb9E9Q5G2 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb9E9Q5G2 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb9E9Q5G2 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb9E9Q5G2 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb9E9Q5G2 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb9E9Q5G2 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhb9E9Q5G2 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb9E9Q5G2 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb9E9Q5G2 Gm14042-201ENSMUST00000120139 833 ntBASIC17.14■□□□□ 0.33
Pcdhb9E9Q5G2 Gm6222-201ENSMUST00000120787 396 ntBASIC17.14■□□□□ 0.33
Pcdhb9E9Q5G2 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC17.14■□□□□ 0.33
Pcdhb9E9Q5G2 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb9E9Q5G2 Gm27533-201ENSMUST00000183800 152 ntBASIC17.14■□□□□ 0.33
Pcdhb9E9Q5G2 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb9E9Q5G2 AC149588.3-201ENSMUST00000227515 150 ntBASIC17.14■□□□□ 0.33
Pcdhb9E9Q5G2 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb9E9Q5G2 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhb9E9Q5G2 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb9E9Q5G2 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb9E9Q5G2 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC17.14■□□□□ 0.33
Pcdhb9E9Q5G2 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb9E9Q5G2 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb9E9Q5G2 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb9E9Q5G2 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb9E9Q5G2 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb9E9Q5G2 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb9E9Q5G2 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb9E9Q5G2 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb9E9Q5G2 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb9E9Q5G2 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdhb9E9Q5G2 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb9E9Q5G2 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb9E9Q5G2 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb9E9Q5G2 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb9E9Q5G2 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Pcdhb9E9Q5G2 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb9E9Q5G2 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb9E9Q5G2 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb9E9Q5G2 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb9E9Q5G2 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb9E9Q5G2 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb9E9Q5G2 Gm25144-201ENSMUST00000179561 110 ntBASIC17.13■□□□□ 0.33
Pcdhb9E9Q5G2 Gm25352-201ENSMUST00000179815 110 ntBASIC17.13■□□□□ 0.33
Pcdhb9E9Q5G2 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb9E9Q5G2 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb9E9Q5G2 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb9E9Q5G2 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb9E9Q5G2 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb9E9Q5G2 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Pcdhb9E9Q5G2 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb9E9Q5G2 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb9E9Q5G2 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb9E9Q5G2 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb9E9Q5G2 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb9E9Q5G2 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb9E9Q5G2 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.12■□□□□ 0.33
Pcdhb9E9Q5G2 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms