Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.38□□□□□ -0.11
Srp54bE9PXC0 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Srp54bE9PXC0 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Srp54bE9PXC0 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.38□□□□□ -0.11
Srp54bE9PXC0 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Srp54bE9PXC0 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Srp54bE9PXC0 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Srp54bE9PXC0 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Srp54bE9PXC0 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Srp54bE9PXC0 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Srp54bE9PXC0 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Srp54bE9PXC0 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.38□□□□□ -0.11
Srp54bE9PXC0 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Srp54bE9PXC0 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp54bE9PXC0 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp54bE9PXC0 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp54bE9PXC0 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp54bE9PXC0 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Srp54bE9PXC0 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp54bE9PXC0 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp54bE9PXC0 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp54bE9PXC0 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Srp54bE9PXC0 Gm23547-201ENSMUST00000158210 271 ntBASIC14.37□□□□□ -0.11
Srp54bE9PXC0 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp54bE9PXC0 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.37□□□□□ -0.11
Srp54bE9PXC0 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Srp54bE9PXC0 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.37□□□□□ -0.11
Srp54bE9PXC0 Gm9182-201ENSMUST00000217829 639 ntBASIC14.37□□□□□ -0.11
Srp54bE9PXC0 Gm7775-201ENSMUST00000218871 853 ntBASIC14.37□□□□□ -0.11
Srp54bE9PXC0 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp54bE9PXC0 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp54bE9PXC0 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Srp54bE9PXC0 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp54bE9PXC0 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp54bE9PXC0 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp54bE9PXC0 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp54bE9PXC0 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp54bE9PXC0 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp54bE9PXC0 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp54bE9PXC0 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.37□□□□□ -0.11
Srp54bE9PXC0 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Srp54bE9PXC0 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Srp54bE9PXC0 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp54bE9PXC0 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp54bE9PXC0 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Srp54bE9PXC0 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp54bE9PXC0 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp54bE9PXC0 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp54bE9PXC0 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp54bE9PXC0 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Srp54bE9PXC0 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Srp54bE9PXC0 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Gm15487-201ENSMUST00000122373 465 ntBASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Gm9726-201ENSMUST00000180321 678 ntBASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Gm29310-201ENSMUST00000185468 696 ntBASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Gm21825-201ENSMUST00000185728 696 ntBASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Gm29109-201ENSMUST00000185895 696 ntBASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Gm21896-201ENSMUST00000186520 696 ntBASIC14.36□□□□□ -0.11
Srp54bE9PXC0 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Gm21873-201ENSMUST00000186728 696 ntBASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Gm21794-201ENSMUST00000187056 696 ntBASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Gm21880-201ENSMUST00000187275 696 ntBASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Gm21826-201ENSMUST00000187451 696 ntBASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Gm21198-201ENSMUST00000188393 696 ntBASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Gm21749-201ENSMUST00000189343 696 ntBASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Gm21901-201ENSMUST00000189568 696 ntBASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Gm29424-201ENSMUST00000189716 696 ntBASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Gm28599-201ENSMUST00000189838 694 ntBASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Gm21867-201ENSMUST00000189917 696 ntBASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Gm29269-201ENSMUST00000190087 696 ntBASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Gm21722-201ENSMUST00000190153 696 ntBASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Gm28423-201ENSMUST00000190701 696 ntBASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Gm21899-201ENSMUST00000190745 696 ntBASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Gm21910-201ENSMUST00000191163 696 ntBASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Gm21849-201ENSMUST00000191571 696 ntBASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Gm28678-201ENSMUST00000191593 696 ntBASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Gm20910-201ENSMUST00000193268 696 ntBASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Gm21871-201ENSMUST00000194621 696 ntBASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Gm2423-201ENSMUST00000074863 733 ntBASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms