Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a4A2AX52 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a4A2AX52 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a4A2AX52 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Col6a4A2AX52 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a4A2AX52 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a4A2AX52 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a4A2AX52 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a4A2AX52 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Col6a4A2AX52 Gm27631-201ENSMUST00000184163 466 ntBASIC12.3□□□□□ -0.44
Col6a4A2AX52 Gm37424-201ENSMUST00000191727 561 ntBASIC12.3□□□□□ -0.44
Col6a4A2AX52 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a4A2AX52 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Col6a4A2AX52 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a4A2AX52 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.3□□□□□ -0.44
Col6a4A2AX52 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a4A2AX52 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.3□□□□□ -0.44
Col6a4A2AX52 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a4A2AX52 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Col6a4A2AX52 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a4A2AX52 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.3□□□□□ -0.44
Col6a4A2AX52 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a4A2AX52 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a4A2AX52 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Col6a4A2AX52 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.3□□□□□ -0.44
Col6a4A2AX52 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a4A2AX52 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a4A2AX52 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Col6a4A2AX52 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Col6a4A2AX52 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.29□□□□□ -0.44
Col6a4A2AX52 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a4A2AX52 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.29□□□□□ -0.44
Col6a4A2AX52 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a4A2AX52 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a4A2AX52 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a4A2AX52 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a4A2AX52 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a4A2AX52 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.29□□□□□ -0.44
Col6a4A2AX52 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.29□□□□□ -0.44
Col6a4A2AX52 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Col6a4A2AX52 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a4A2AX52 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.29□□□□□ -0.44
Col6a4A2AX52 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Col6a4A2AX52 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.29□□□□□ -0.44
Col6a4A2AX52 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.29□□□□□ -0.44
Col6a4A2AX52 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.29□□□□□ -0.44
Col6a4A2AX52 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.29□□□□□ -0.44
Col6a4A2AX52 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.29□□□□□ -0.44
Col6a4A2AX52 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a4A2AX52 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a4A2AX52 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a4A2AX52 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Col6a4A2AX52 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a4A2AX52 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a4A2AX52 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a4A2AX52 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a4A2AX52 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a4A2AX52 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a4A2AX52 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Col6a4A2AX52 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a4A2AX52 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a4A2AX52 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a4A2AX52 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a4A2AX52 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Gm9002-201ENSMUST00000178437 499 ntBASIC12.28□□□□□ -0.44
Col6a4A2AX52 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Gm27731-201ENSMUST00000185192 107 ntBASIC12.28□□□□□ -0.44
Col6a4A2AX52 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.28□□□□□ -0.44
Col6a4A2AX52 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Gm16476-201ENSMUST00000221544 139 ntBASIC12.28□□□□□ -0.44
Col6a4A2AX52 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.28□□□□□ -0.44
Col6a4A2AX52 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a4A2AX52 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms