Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Gm4459-201ENSMUST00000118750 468 ntBASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Rps4l-201ENSMUST00000071745 943 ntBASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Rubie-203ENSMUST00000227803 2430 ntBASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC10.93□□□□□ -0.66
Trav6n-6A0A075B6B2 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav6n-6A0A075B6B2 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Trav6n-6A0A075B6B2 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav6n-6A0A075B6B2 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav6n-6A0A075B6B2 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav6n-6A0A075B6B2 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav6n-6A0A075B6B2 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav6n-6A0A075B6B2 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav6n-6A0A075B6B2 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav6n-6A0A075B6B2 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav6n-6A0A075B6B2 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC10.92□□□□□ -0.66
Trav6n-6A0A075B6B2 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC10.92□□□□□ -0.66
Trav6n-6A0A075B6B2 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav6n-6A0A075B6B2 Mir8098-201ENSMUST00000184011 137 ntBASIC10.92□□□□□ -0.66
Trav6n-6A0A075B6B2 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Trav6n-6A0A075B6B2 Gm34391-201ENSMUST00000203706 907 ntBASIC10.92□□□□□ -0.66
Trav6n-6A0A075B6B2 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav6n-6A0A075B6B2 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC10.92□□□□□ -0.66
Trav6n-6A0A075B6B2 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav6n-6A0A075B6B2 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav6n-6A0A075B6B2 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav6n-6A0A075B6B2 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav6n-6A0A075B6B2 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav6n-6A0A075B6B2 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Trav6n-6A0A075B6B2 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav6n-6A0A075B6B2 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav6n-6A0A075B6B2 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav6n-6A0A075B6B2 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav6n-6A0A075B6B2 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav6n-6A0A075B6B2 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav6n-6A0A075B6B2 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Trav6n-6A0A075B6B2 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav6n-6A0A075B6B2 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC10.92□□□□□ -0.66
Trav6n-6A0A075B6B2 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav6n-6A0A075B6B2 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav6n-6A0A075B6B2 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav6n-6A0A075B6B2 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav6n-6A0A075B6B2 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav6n-6A0A075B6B2 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav6n-6A0A075B6B2 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav6n-6A0A075B6B2 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav6n-6A0A075B6B2 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav6n-6A0A075B6B2 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav6n-6A0A075B6B2 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav6n-6A0A075B6B2 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav6n-6A0A075B6B2 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav6n-6A0A075B6B2 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav6n-6A0A075B6B2 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Trav6n-6A0A075B6B2 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav6n-6A0A075B6B2 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Trav6n-6A0A075B6B2 Gm8344-201ENSMUST00000119813 856 ntBASIC10.91□□□□□ -0.66
Trav6n-6A0A075B6B2 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav6n-6A0A075B6B2 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Trav6n-6A0A075B6B2 Gm7506-201ENSMUST00000207758 815 ntBASIC10.91□□□□□ -0.66
Trav6n-6A0A075B6B2 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC10.91□□□□□ -0.66
Trav6n-6A0A075B6B2 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms