Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Trav8n-2A0A075B633 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8n-2A0A075B633 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8n-2A0A075B633 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.34□□□□□ -0.27
Trav8n-2A0A075B633 Gm12585-201ENSMUST00000117307 290 ntBASIC13.34□□□□□ -0.27
Trav8n-2A0A075B633 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trav8n-2A0A075B633 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.34□□□□□ -0.27
Trav8n-2A0A075B633 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Trav8n-2A0A075B633 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8n-2A0A075B633 Gm21854-201ENSMUST00000179901 471 ntBASIC13.34□□□□□ -0.27
Trav8n-2A0A075B633 Gm10766-202ENSMUST00000194123 606 ntBASIC13.34□□□□□ -0.27
Trav8n-2A0A075B633 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8n-2A0A075B633 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.34□□□□□ -0.27
Trav8n-2A0A075B633 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav8n-2A0A075B633 Gm18624-201ENSMUST00000220966 658 ntBASIC13.34□□□□□ -0.27
Trav8n-2A0A075B633 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8n-2A0A075B633 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8n-2A0A075B633 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8n-2A0A075B633 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8n-2A0A075B633 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav8n-2A0A075B633 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8n-2A0A075B633 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8n-2A0A075B633 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8n-2A0A075B633 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8n-2A0A075B633 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8n-2A0A075B633 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav8n-2A0A075B633 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8n-2A0A075B633 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav8n-2A0A075B633 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav8n-2A0A075B633 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Trav8n-2A0A075B633 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Trav8n-2A0A075B633 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8n-2A0A075B633 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trav8n-2A0A075B633 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8n-2A0A075B633 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8n-2A0A075B633 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8n-2A0A075B633 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8n-2A0A075B633 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8n-2A0A075B633 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8n-2A0A075B633 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8n-2A0A075B633 Gm15824-201ENSMUST00000119516 955 ntBASIC13.33□□□□□ -0.28
Trav8n-2A0A075B633 Gm15393-201ENSMUST00000120499 219 ntBASIC13.33□□□□□ -0.28
Trav8n-2A0A075B633 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8n-2A0A075B633 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8n-2A0A075B633 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.33□□□□□ -0.28
Trav8n-2A0A075B633 Mir6392-201ENSMUST00000184924 108 ntBASIC13.33□□□□□ -0.28
Trav8n-2A0A075B633 Gm33320-201ENSMUST00000192232 530 ntBASIC13.33□□□□□ -0.28
Trav8n-2A0A075B633 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.33□□□□□ -0.28
Trav8n-2A0A075B633 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav8n-2A0A075B633 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8n-2A0A075B633 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8n-2A0A075B633 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav8n-2A0A075B633 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8n-2A0A075B633 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trav8n-2A0A075B633 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav8n-2A0A075B633 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8n-2A0A075B633 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trav8n-2A0A075B633 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.33□□□□□ -0.28
Trav8n-2A0A075B633 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8n-2A0A075B633 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8n-2A0A075B633 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8n-2A0A075B633 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav8n-2A0A075B633 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8n-2A0A075B633 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8n-2A0A075B633 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav8n-2A0A075B633 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8n-2A0A075B633 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8n-2A0A075B633 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8n-2A0A075B633 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav8n-2A0A075B633 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8n-2A0A075B633 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Trav8n-2A0A075B633 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav8n-2A0A075B633 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.32□□□□□ -0.28
Trav8n-2A0A075B633 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Trav8n-2A0A075B633 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav8n-2A0A075B633 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8n-2A0A075B633 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8n-2A0A075B633 Gm8602-201ENSMUST00000184045 607 ntBASIC13.32□□□□□ -0.28
Trav8n-2A0A075B633 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.32□□□□□ -0.28
Trav8n-2A0A075B633 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8n-2A0A075B633 Gm18062-201ENSMUST00000208020 547 ntBASIC13.32□□□□□ -0.28
Trav8n-2A0A075B633 Gm18055-201ENSMUST00000208254 547 ntBASIC13.32□□□□□ -0.28
Trav8n-2A0A075B633 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8n-2A0A075B633 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.32□□□□□ -0.28
Trav8n-2A0A075B633 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8n-2A0A075B633 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav8n-2A0A075B633 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8n-2A0A075B633 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8n-2A0A075B633 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav8n-2A0A075B633 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8n-2A0A075B633 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav8n-2A0A075B633 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8n-2A0A075B633 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8n-2A0A075B633 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8n-2A0A075B633 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav8n-2A0A075B633 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav8n-2A0A075B633 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8n-2A0A075B633 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8n-2A0A075B633 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav8n-2A0A075B633 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms