Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5-1A0A075B5Z7 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5-1A0A075B5Z7 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5-1A0A075B5Z7 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5-1A0A075B5Z7 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5-1A0A075B5Z7 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.54□□□□□ -0.4
Trav5-1A0A075B5Z7 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5-1A0A075B5Z7 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5-1A0A075B5Z7 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5-1A0A075B5Z7 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5-1A0A075B5Z7 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav5-1A0A075B5Z7 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5-1A0A075B5Z7 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trav5-1A0A075B5Z7 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5-1A0A075B5Z7 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Trav5-1A0A075B5Z7 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav5-1A0A075B5Z7 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5-1A0A075B5Z7 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Trav5-1A0A075B5Z7 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5-1A0A075B5Z7 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5-1A0A075B5Z7 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5-1A0A075B5Z7 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5-1A0A075B5Z7 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav5-1A0A075B5Z7 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5-1A0A075B5Z7 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5-1A0A075B5Z7 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5-1A0A075B5Z7 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav5-1A0A075B5Z7 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5-1A0A075B5Z7 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5-1A0A075B5Z7 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav5-1A0A075B5Z7 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5-1A0A075B5Z7 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav5-1A0A075B5Z7 Gm9719-201ENSMUST00000162765 543 ntBASIC12.53□□□□□ -0.4
Trav5-1A0A075B5Z7 Gm18766-201ENSMUST00000189811 808 ntBASIC12.53□□□□□ -0.4
Trav5-1A0A075B5Z7 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5-1A0A075B5Z7 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.53□□□□□ -0.4
Trav5-1A0A075B5Z7 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5-1A0A075B5Z7 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5-1A0A075B5Z7 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.53□□□□□ -0.4
Trav5-1A0A075B5Z7 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Trav5-1A0A075B5Z7 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5-1A0A075B5Z7 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5-1A0A075B5Z7 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5-1A0A075B5Z7 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav5-1A0A075B5Z7 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5-1A0A075B5Z7 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav5-1A0A075B5Z7 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5-1A0A075B5Z7 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav5-1A0A075B5Z7 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5-1A0A075B5Z7 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav5-1A0A075B5Z7 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav5-1A0A075B5Z7 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5-1A0A075B5Z7 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5-1A0A075B5Z7 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5-1A0A075B5Z7 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav5-1A0A075B5Z7 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav5-1A0A075B5Z7 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav5-1A0A075B5Z7 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.4
Trav5-1A0A075B5Z7 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav5-1A0A075B5Z7 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav5-1A0A075B5Z7 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav5-1A0A075B5Z7 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav5-1A0A075B5Z7 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.52□□□□□ -0.4
Trav5-1A0A075B5Z7 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav5-1A0A075B5Z7 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav5-1A0A075B5Z7 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav5-1A0A075B5Z7 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav5-1A0A075B5Z7 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Trav5-1A0A075B5Z7 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav5-1A0A075B5Z7 Gm13823-201ENSMUST00000119930 345 ntBASIC12.52□□□□□ -0.41
Trav5-1A0A075B5Z7 Gm14042-201ENSMUST00000120139 833 ntBASIC12.52□□□□□ -0.41
Trav5-1A0A075B5Z7 Gm6222-201ENSMUST00000120787 396 ntBASIC12.52□□□□□ -0.41
Trav5-1A0A075B5Z7 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5-1A0A075B5Z7 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5-1A0A075B5Z7 Gm29541-201ENSMUST00000191351 678 ntBASIC12.52□□□□□ -0.41
Trav5-1A0A075B5Z7 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.52□□□□□ -0.41
Trav5-1A0A075B5Z7 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5-1A0A075B5Z7 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5-1A0A075B5Z7 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5-1A0A075B5Z7 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5-1A0A075B5Z7 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav5-1A0A075B5Z7 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trav5-1A0A075B5Z7 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.52□□□□□ -0.41
Trav5-1A0A075B5Z7 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5-1A0A075B5Z7 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Trav5-1A0A075B5Z7 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5-1A0A075B5Z7 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Trav5-1A0A075B5Z7 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trav5-1A0A075B5Z7 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trav5-1A0A075B5Z7 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5-1A0A075B5Z7 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Trav5-1A0A075B5Z7 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5-1A0A075B5Z7 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5-1A0A075B5Z7 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav5-1A0A075B5Z7 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5-1A0A075B5Z7 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5-1A0A075B5Z7 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5-1A0A075B5Z7 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Trav5-1A0A075B5Z7 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5-1A0A075B5Z7 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms