Protein–RNA interactions for Protein: Q9Z104

Hmg20b, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20bQ9Z104 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmg20bQ9Z104 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmg20bQ9Z104 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Hmg20bQ9Z104 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmg20bQ9Z104 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Hmg20bQ9Z104 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Hmg20bQ9Z104 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmg20bQ9Z104 Gm11543-201ENSMUST00000120758 370 ntBASIC17.24■□□□□ 0.35
Hmg20bQ9Z104 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.24■□□□□ 0.35
Hmg20bQ9Z104 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Hmg20bQ9Z104 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hmg20bQ9Z104 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.24■□□□□ 0.35
Hmg20bQ9Z104 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmg20bQ9Z104 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC17.24■□□□□ 0.35
Hmg20bQ9Z104 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmg20bQ9Z104 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmg20bQ9Z104 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmg20bQ9Z104 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmg20bQ9Z104 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmg20bQ9Z104 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmg20bQ9Z104 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmg20bQ9Z104 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hmg20bQ9Z104 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmg20bQ9Z104 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hmg20bQ9Z104 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hmg20bQ9Z104 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.23■□□□□ 0.35
Hmg20bQ9Z104 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.23■□□□□ 0.35
Hmg20bQ9Z104 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmg20bQ9Z104 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hmg20bQ9Z104 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmg20bQ9Z104 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Hmg20bQ9Z104 Gm43205-201ENSMUST00000198622 1968 ntBASIC17.23■□□□□ 0.35
Hmg20bQ9Z104 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.23■□□□□ 0.35
Hmg20bQ9Z104 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hmg20bQ9Z104 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC17.23■□□□□ 0.35
Hmg20bQ9Z104 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hmg20bQ9Z104 Gm18737-201ENSMUST00000173594 937 ntBASIC17.23■□□□□ 0.35
Hmg20bQ9Z104 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.23■□□□□ 0.35
Hmg20bQ9Z104 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.23■□□□□ 0.35
Hmg20bQ9Z104 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Hmg20bQ9Z104 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmg20bQ9Z104 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmg20bQ9Z104 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmg20bQ9Z104 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmg20bQ9Z104 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmg20bQ9Z104 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC17.23■□□□□ 0.35
Hmg20bQ9Z104 AC148324.1-201ENSMUST00000219034 4240 ntBASIC17.23■□□□□ 0.35
Hmg20bQ9Z104 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC17.23■□□□□ 0.35
Hmg20bQ9Z104 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC17.22■□□□□ 0.35
Hmg20bQ9Z104 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmg20bQ9Z104 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmg20bQ9Z104 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmg20bQ9Z104 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmg20bQ9Z104 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hmg20bQ9Z104 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC17.22■□□□□ 0.35
Hmg20bQ9Z104 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.22■□□□□ 0.35
Hmg20bQ9Z104 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.22■□□□□ 0.35
Hmg20bQ9Z104 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.22■□□□□ 0.35
Hmg20bQ9Z104 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.22■□□□□ 0.35
Hmg20bQ9Z104 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC17.22■□□□□ 0.35
Hmg20bQ9Z104 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.22■□□□□ 0.35
Hmg20bQ9Z104 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmg20bQ9Z104 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmg20bQ9Z104 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmg20bQ9Z104 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hmg20bQ9Z104 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Hmg20bQ9Z104 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmg20bQ9Z104 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Hmg20bQ9Z104 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmg20bQ9Z104 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.22■□□□□ 0.35
Hmg20bQ9Z104 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Hmg20bQ9Z104 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmg20bQ9Z104 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Hmg20bQ9Z104 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Hmg20bQ9Z104 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Hmg20bQ9Z104 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmg20bQ9Z104 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmg20bQ9Z104 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Hmg20bQ9Z104 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Hmg20bQ9Z104 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Hmg20bQ9Z104 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC17.21■□□□□ 0.35
Hmg20bQ9Z104 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Hmg20bQ9Z104 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmg20bQ9Z104 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmg20bQ9Z104 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmg20bQ9Z104 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC17.21■□□□□ 0.35
Hmg20bQ9Z104 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmg20bQ9Z104 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hmg20bQ9Z104 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmg20bQ9Z104 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmg20bQ9Z104 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmg20bQ9Z104 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmg20bQ9Z104 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmg20bQ9Z104 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hmg20bQ9Z104 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.21■□□□□ 0.35
Hmg20bQ9Z104 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.21■□□□□ 0.35
Hmg20bQ9Z104 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hmg20bQ9Z104 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC17.21■□□□□ 0.35
Hmg20bQ9Z104 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC17.21■□□□□ 0.35
Hmg20bQ9Z104 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms