Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
Cdc40Q9DC48 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdc40Q9DC48 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.59□□□□□ -0.23
Cdc40Q9DC48 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdc40Q9DC48 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdc40Q9DC48 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdc40Q9DC48 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdc40Q9DC48 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Cdc40Q9DC48 Gm13616-201ENSMUST00000120600 222 ntBASIC13.59□□□□□ -0.23
Cdc40Q9DC48 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.59□□□□□ -0.23
Cdc40Q9DC48 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdc40Q9DC48 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.59□□□□□ -0.23
Cdc40Q9DC48 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdc40Q9DC48 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdc40Q9DC48 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.59□□□□□ -0.23
Cdc40Q9DC48 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.59□□□□□ -0.23
Cdc40Q9DC48 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.59□□□□□ -0.23
Cdc40Q9DC48 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdc40Q9DC48 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdc40Q9DC48 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdc40Q9DC48 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Cdc40Q9DC48 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.59□□□□□ -0.23
Cdc40Q9DC48 Gm10154-201ENSMUST00000084445 354 ntBASIC13.59□□□□□ -0.23
Cdc40Q9DC48 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.59□□□□□ -0.23
Cdc40Q9DC48 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdc40Q9DC48 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cdc40Q9DC48 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdc40Q9DC48 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdc40Q9DC48 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdc40Q9DC48 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdc40Q9DC48 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdc40Q9DC48 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdc40Q9DC48 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdc40Q9DC48 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdc40Q9DC48 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdc40Q9DC48 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cdc40Q9DC48 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.23
Cdc40Q9DC48 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Cdc40Q9DC48 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.58□□□□□ -0.23
Cdc40Q9DC48 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Cdc40Q9DC48 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.58□□□□□ -0.23
Cdc40Q9DC48 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Cdc40Q9DC48 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdc40Q9DC48 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdc40Q9DC48 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdc40Q9DC48 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdc40Q9DC48 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdc40Q9DC48 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdc40Q9DC48 Gm9385-201ENSMUST00000117563 472 ntBASIC13.58□□□□□ -0.24
Cdc40Q9DC48 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.58□□□□□ -0.24
Cdc40Q9DC48 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.58□□□□□ -0.24
Cdc40Q9DC48 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdc40Q9DC48 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Cdc40Q9DC48 Gm5312-201ENSMUST00000203728 547 ntBASIC13.58□□□□□ -0.24
Cdc40Q9DC48 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.58□□□□□ -0.24
Cdc40Q9DC48 Gm45612-201ENSMUST00000211320 160 ntBASIC13.58□□□□□ -0.24
Cdc40Q9DC48 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.58□□□□□ -0.24
Cdc40Q9DC48 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.58□□□□□ -0.24
Cdc40Q9DC48 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.58□□□□□ -0.24
Cdc40Q9DC48 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdc40Q9DC48 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdc40Q9DC48 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdc40Q9DC48 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Cdc40Q9DC48 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdc40Q9DC48 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Cdc40Q9DC48 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdc40Q9DC48 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdc40Q9DC48 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdc40Q9DC48 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdc40Q9DC48 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdc40Q9DC48 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdc40Q9DC48 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdc40Q9DC48 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdc40Q9DC48 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdc40Q9DC48 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.58□□□□□ -0.24
Cdc40Q9DC48 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdc40Q9DC48 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdc40Q9DC48 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdc40Q9DC48 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdc40Q9DC48 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdc40Q9DC48 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdc40Q9DC48 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdc40Q9DC48 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.57□□□□□ -0.24
Cdc40Q9DC48 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Cdc40Q9DC48 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.57□□□□□ -0.24
Cdc40Q9DC48 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Cdc40Q9DC48 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdc40Q9DC48 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.57□□□□□ -0.24
Cdc40Q9DC48 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdc40Q9DC48 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdc40Q9DC48 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdc40Q9DC48 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdc40Q9DC48 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.57□□□□□ -0.24
Cdc40Q9DC48 Gm16198-201ENSMUST00000118766 670 ntBASIC13.57□□□□□ -0.24
Cdc40Q9DC48 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdc40Q9DC48 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdc40Q9DC48 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Cdc40Q9DC48 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdc40Q9DC48 Gm44872-201ENSMUST00000207864 420 ntBASIC13.57□□□□□ -0.24
Cdc40Q9DC48 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms