Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Chmp5Q9D7S9 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp5Q9D7S9 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp5Q9D7S9 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp5Q9D7S9 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp5Q9D7S9 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp5Q9D7S9 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp5Q9D7S9 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp5Q9D7S9 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp5Q9D7S9 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Chmp5Q9D7S9 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp5Q9D7S9 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp5Q9D7S9 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.32■□□□□ 0.52
Chmp5Q9D7S9 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp5Q9D7S9 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp5Q9D7S9 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Chmp5Q9D7S9 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Chmp5Q9D7S9 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Chmp5Q9D7S9 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC18.32■□□□□ 0.52
Chmp5Q9D7S9 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC18.32■□□□□ 0.52
Chmp5Q9D7S9 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp5Q9D7S9 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Chmp5Q9D7S9 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp5Q9D7S9 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
Chmp5Q9D7S9 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Chmp5Q9D7S9 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp5Q9D7S9 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp5Q9D7S9 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp5Q9D7S9 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp5Q9D7S9 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp5Q9D7S9 Gm38042-201ENSMUST00000191614 5208 ntBASIC18.31■□□□□ 0.52
Chmp5Q9D7S9 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp5Q9D7S9 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp5Q9D7S9 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp5Q9D7S9 Gm25990-201ENSMUST00000102440 86 ntBASIC18.31■□□□□ 0.52
Chmp5Q9D7S9 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp5Q9D7S9 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp5Q9D7S9 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.31■□□□□ 0.52
Chmp5Q9D7S9 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.31■□□□□ 0.52
Chmp5Q9D7S9 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.31■□□□□ 0.52
Chmp5Q9D7S9 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.31■□□□□ 0.52
Chmp5Q9D7S9 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.31■□□□□ 0.52
Chmp5Q9D7S9 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp5Q9D7S9 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp5Q9D7S9 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp5Q9D7S9 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp5Q9D7S9 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Chmp5Q9D7S9 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp5Q9D7S9 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp5Q9D7S9 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp5Q9D7S9 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp5Q9D7S9 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp5Q9D7S9 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp5Q9D7S9 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp5Q9D7S9 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp5Q9D7S9 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Chmp5Q9D7S9 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp5Q9D7S9 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp5Q9D7S9 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp5Q9D7S9 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC18.3■□□□□ 0.52
Chmp5Q9D7S9 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp5Q9D7S9 Gm19863-201ENSMUST00000192480 2218 ntBASIC18.3■□□□□ 0.52
Chmp5Q9D7S9 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Chmp5Q9D7S9 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp5Q9D7S9 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Chmp5Q9D7S9 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp5Q9D7S9 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp5Q9D7S9 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Chmp5Q9D7S9 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp5Q9D7S9 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC18.3■□□□□ 0.52
Chmp5Q9D7S9 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp5Q9D7S9 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Chmp5Q9D7S9 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp5Q9D7S9 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp5Q9D7S9 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp5Q9D7S9 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Chmp5Q9D7S9 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp5Q9D7S9 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp5Q9D7S9 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp5Q9D7S9 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp5Q9D7S9 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp5Q9D7S9 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp5Q9D7S9 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp5Q9D7S9 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC18.29■□□□□ 0.52
Chmp5Q9D7S9 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp5Q9D7S9 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp5Q9D7S9 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp5Q9D7S9 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Chmp5Q9D7S9 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC18.29■□□□□ 0.52
Chmp5Q9D7S9 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Chmp5Q9D7S9 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp5Q9D7S9 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Chmp5Q9D7S9 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.29■□□□□ 0.52
Chmp5Q9D7S9 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp5Q9D7S9 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp5Q9D7S9 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp5Q9D7S9 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp5Q9D7S9 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp5Q9D7S9 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp5Q9D7S9 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms