Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Gm37722-201ENSMUST00000193757 208 ntBASIC12.21□□□□□ -0.45
ShpkQ9D5J6 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ShpkQ9D5J6 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC12.21□□□□□ -0.45
ShpkQ9D5J6 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.21□□□□□ -0.45
ShpkQ9D5J6 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ShpkQ9D5J6 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ShpkQ9D5J6 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
ShpkQ9D5J6 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
ShpkQ9D5J6 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
ShpkQ9D5J6 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
ShpkQ9D5J6 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
ShpkQ9D5J6 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
ShpkQ9D5J6 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.21□□□□□ -0.46
ShpkQ9D5J6 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
ShpkQ9D5J6 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
ShpkQ9D5J6 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
ShpkQ9D5J6 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
ShpkQ9D5J6 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
ShpkQ9D5J6 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
ShpkQ9D5J6 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
ShpkQ9D5J6 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
ShpkQ9D5J6 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ShpkQ9D5J6 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ShpkQ9D5J6 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
ShpkQ9D5J6 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ShpkQ9D5J6 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
ShpkQ9D5J6 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ShpkQ9D5J6 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ShpkQ9D5J6 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ShpkQ9D5J6 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.2□□□□□ -0.46
ShpkQ9D5J6 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ShpkQ9D5J6 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ShpkQ9D5J6 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
ShpkQ9D5J6 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ShpkQ9D5J6 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
ShpkQ9D5J6 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ShpkQ9D5J6 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ShpkQ9D5J6 Gm715-201ENSMUST00000117865 831 ntBASIC12.2□□□□□ -0.46
ShpkQ9D5J6 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ShpkQ9D5J6 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ShpkQ9D5J6 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.2□□□□□ -0.46
ShpkQ9D5J6 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ShpkQ9D5J6 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
ShpkQ9D5J6 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.2□□□□□ -0.46
ShpkQ9D5J6 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
ShpkQ9D5J6 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.2□□□□□ -0.46
ShpkQ9D5J6 AC153881.1-201ENSMUST00000214448 284 ntBASIC12.2□□□□□ -0.46
ShpkQ9D5J6 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC12.2□□□□□ -0.46
ShpkQ9D5J6 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ShpkQ9D5J6 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ShpkQ9D5J6 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ShpkQ9D5J6 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ShpkQ9D5J6 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ShpkQ9D5J6 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
ShpkQ9D5J6 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC12.2□□□□□ -0.46
ShpkQ9D5J6 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.2□□□□□ -0.46
ShpkQ9D5J6 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.2□□□□□ -0.46
ShpkQ9D5J6 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ShpkQ9D5J6 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
ShpkQ9D5J6 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ShpkQ9D5J6 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ShpkQ9D5J6 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
ShpkQ9D5J6 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
ShpkQ9D5J6 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
ShpkQ9D5J6 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
ShpkQ9D5J6 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ShpkQ9D5J6 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ShpkQ9D5J6 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
ShpkQ9D5J6 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ShpkQ9D5J6 Grk6-207ENSMUST00000225925 2769 ntBASIC12.19□□□□□ -0.46
ShpkQ9D5J6 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ShpkQ9D5J6 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ShpkQ9D5J6 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ShpkQ9D5J6 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
ShpkQ9D5J6 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
ShpkQ9D5J6 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ShpkQ9D5J6 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
ShpkQ9D5J6 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
ShpkQ9D5J6 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ShpkQ9D5J6 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ShpkQ9D5J6 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ShpkQ9D5J6 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ShpkQ9D5J6 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC12.19□□□□□ -0.46
ShpkQ9D5J6 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ShpkQ9D5J6 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
ShpkQ9D5J6 Gm43767-201ENSMUST00000198933 381 ntBASIC12.19□□□□□ -0.46
ShpkQ9D5J6 Gm18101-201ENSMUST00000215769 548 ntBASIC12.19□□□□□ -0.46
ShpkQ9D5J6 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.19□□□□□ -0.46
ShpkQ9D5J6 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ShpkQ9D5J6 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC12.19□□□□□ -0.46
ShpkQ9D5J6 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ShpkQ9D5J6 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ShpkQ9D5J6 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.19□□□□□ -0.46
ShpkQ9D5J6 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
ShpkQ9D5J6 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
ShpkQ9D5J6 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ShpkQ9D5J6 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ShpkQ9D5J6 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.19□□□□□ -0.46
ShpkQ9D5J6 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ShpkQ9D5J6 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms