Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Shmt2Q9CZN7 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14□□□□□ -0.17
Shmt2Q9CZN7 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14□□□□□ -0.17
Shmt2Q9CZN7 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shmt2Q9CZN7 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shmt2Q9CZN7 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14□□□□□ -0.17
Shmt2Q9CZN7 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14□□□□□ -0.17
Shmt2Q9CZN7 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Shmt2Q9CZN7 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Shmt2Q9CZN7 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shmt2Q9CZN7 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shmt2Q9CZN7 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shmt2Q9CZN7 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14□□□□□ -0.17
Shmt2Q9CZN7 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14□□□□□ -0.17
Shmt2Q9CZN7 Gm27300-201ENSMUST00000184085 97 ntBASIC14□□□□□ -0.17
Shmt2Q9CZN7 Gm27335-201ENSMUST00000184758 97 ntBASIC14□□□□□ -0.17
Shmt2Q9CZN7 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14□□□□□ -0.17
Shmt2Q9CZN7 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14□□□□□ -0.17
Shmt2Q9CZN7 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shmt2Q9CZN7 Gm5184-201ENSMUST00000220417 1702 ntBASIC14□□□□□ -0.17
Shmt2Q9CZN7 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shmt2Q9CZN7 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shmt2Q9CZN7 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Shmt2Q9CZN7 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Shmt2Q9CZN7 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shmt2Q9CZN7 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14□□□□□ -0.17
Shmt2Q9CZN7 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shmt2Q9CZN7 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shmt2Q9CZN7 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Shmt2Q9CZN7 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shmt2Q9CZN7 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shmt2Q9CZN7 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.99□□□□□ -0.17
Shmt2Q9CZN7 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Shmt2Q9CZN7 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.99□□□□□ -0.17
Shmt2Q9CZN7 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Shmt2Q9CZN7 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Shmt2Q9CZN7 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Shmt2Q9CZN7 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shmt2Q9CZN7 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Shmt2Q9CZN7 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Shmt2Q9CZN7 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Shmt2Q9CZN7 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.99□□□□□ -0.17
Shmt2Q9CZN7 Gm9727-201ENSMUST00000161387 555 ntBASIC13.99□□□□□ -0.17
Shmt2Q9CZN7 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Shmt2Q9CZN7 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.99□□□□□ -0.17
Shmt2Q9CZN7 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Shmt2Q9CZN7 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shmt2Q9CZN7 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shmt2Q9CZN7 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Shmt2Q9CZN7 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shmt2Q9CZN7 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shmt2Q9CZN7 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shmt2Q9CZN7 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Shmt2Q9CZN7 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shmt2Q9CZN7 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shmt2Q9CZN7 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Shmt2Q9CZN7 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shmt2Q9CZN7 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shmt2Q9CZN7 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shmt2Q9CZN7 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Shmt2Q9CZN7 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt2Q9CZN7 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt2Q9CZN7 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt2Q9CZN7 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Shmt2Q9CZN7 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt2Q9CZN7 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt2Q9CZN7 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.98□□□□□ -0.17
Shmt2Q9CZN7 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt2Q9CZN7 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.98□□□□□ -0.17
Shmt2Q9CZN7 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt2Q9CZN7 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt2Q9CZN7 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt2Q9CZN7 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt2Q9CZN7 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt2Q9CZN7 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt2Q9CZN7 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Shmt2Q9CZN7 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
Shmt2Q9CZN7 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Shmt2Q9CZN7 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.98□□□□□ -0.17
Shmt2Q9CZN7 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt2Q9CZN7 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt2Q9CZN7 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt2Q9CZN7 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.98□□□□□ -0.17
Shmt2Q9CZN7 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Shmt2Q9CZN7 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Shmt2Q9CZN7 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.98□□□□□ -0.17
Shmt2Q9CZN7 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt2Q9CZN7 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt2Q9CZN7 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt2Q9CZN7 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.98□□□□□ -0.17
Shmt2Q9CZN7 Matn2-206ENSMUST00000228570 2798 ntBASIC13.98□□□□□ -0.17
Shmt2Q9CZN7 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt2Q9CZN7 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt2Q9CZN7 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
Shmt2Q9CZN7 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.98□□□□□ -0.17
Shmt2Q9CZN7 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.98□□□□□ -0.17
Shmt2Q9CZN7 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Shmt2Q9CZN7 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Shmt2Q9CZN7 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt2Q9CZN7 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms