Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hdhd3Q9CYW4 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hdhd3Q9CYW4 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Hdhd3Q9CYW4 Gm15358-201ENSMUST00000119249 520 ntBASIC11.92□□□□□ -0.5
Hdhd3Q9CYW4 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Hdhd3Q9CYW4 Gm43767-201ENSMUST00000198933 381 ntBASIC11.92□□□□□ -0.5
Hdhd3Q9CYW4 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC11.92□□□□□ -0.5
Hdhd3Q9CYW4 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hdhd3Q9CYW4 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Hdhd3Q9CYW4 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hdhd3Q9CYW4 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.92□□□□□ -0.5
Hdhd3Q9CYW4 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC11.92□□□□□ -0.5
Hdhd3Q9CYW4 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hdhd3Q9CYW4 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hdhd3Q9CYW4 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hdhd3Q9CYW4 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hdhd3Q9CYW4 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hdhd3Q9CYW4 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hdhd3Q9CYW4 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hdhd3Q9CYW4 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hdhd3Q9CYW4 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hdhd3Q9CYW4 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hdhd3Q9CYW4 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hdhd3Q9CYW4 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hdhd3Q9CYW4 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hdhd3Q9CYW4 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hdhd3Q9CYW4 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Hdhd3Q9CYW4 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hdhd3Q9CYW4 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hdhd3Q9CYW4 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Gm10231-201ENSMUST00000181584 441 ntBASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Gm10175-202ENSMUST00000208752 441 ntBASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Gm29361-201ENSMUST00000183323 2000 ntBASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hdhd3Q9CYW4 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Hdhd3Q9CYW4 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.9□□□□□ -0.5
Hdhd3Q9CYW4 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hdhd3Q9CYW4 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Hdhd3Q9CYW4 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hdhd3Q9CYW4 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hdhd3Q9CYW4 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Hdhd3Q9CYW4 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hdhd3Q9CYW4 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Hdhd3Q9CYW4 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC11.9□□□□□ -0.5
Hdhd3Q9CYW4 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC11.9□□□□□ -0.5
Hdhd3Q9CYW4 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hdhd3Q9CYW4 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Hdhd3Q9CYW4 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hdhd3Q9CYW4 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Hdhd3Q9CYW4 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC11.9□□□□□ -0.5
Hdhd3Q9CYW4 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hdhd3Q9CYW4 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hdhd3Q9CYW4 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hdhd3Q9CYW4 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hdhd3Q9CYW4 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hdhd3Q9CYW4 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms