Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nip7Q9CXK8 Gm25857-201ENSMUST00000082788 129 ntBASIC18.14■□□□□ 0.49
Nip7Q9CXK8 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nip7Q9CXK8 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Nip7Q9CXK8 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nip7Q9CXK8 Gm44616-201ENSMUST00000206417 1732 ntBASIC18.14■□□□□ 0.49
Nip7Q9CXK8 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nip7Q9CXK8 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nip7Q9CXK8 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.14■□□□□ 0.49
Nip7Q9CXK8 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nip7Q9CXK8 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nip7Q9CXK8 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nip7Q9CXK8 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nip7Q9CXK8 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nip7Q9CXK8 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nip7Q9CXK8 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Nip7Q9CXK8 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
Nip7Q9CXK8 Gm12585-201ENSMUST00000117307 290 ntBASIC18.13■□□□□ 0.49
Nip7Q9CXK8 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Nip7Q9CXK8 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Nip7Q9CXK8 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC18.13■□□□□ 0.49
Nip7Q9CXK8 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Nip7Q9CXK8 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nip7Q9CXK8 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC18.13■□□□□ 0.49
Nip7Q9CXK8 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Nip7Q9CXK8 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Nip7Q9CXK8 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Nip7Q9CXK8 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC18.13■□□□□ 0.49
Nip7Q9CXK8 Gm45667-201ENSMUST00000210380 1316 ntBASIC18.13■□□□□ 0.49
Nip7Q9CXK8 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Nip7Q9CXK8 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Nip7Q9CXK8 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nip7Q9CXK8 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nip7Q9CXK8 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nip7Q9CXK8 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Nip7Q9CXK8 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nip7Q9CXK8 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Nip7Q9CXK8 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nip7Q9CXK8 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nip7Q9CXK8 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nip7Q9CXK8 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Nip7Q9CXK8 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nip7Q9CXK8 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nip7Q9CXK8 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC18.12■□□□□ 0.49
Nip7Q9CXK8 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Nip7Q9CXK8 AC121598.1-201ENSMUST00000228224 1019 ntBASIC18.12■□□□□ 0.49
Nip7Q9CXK8 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nip7Q9CXK8 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nip7Q9CXK8 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nip7Q9CXK8 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nip7Q9CXK8 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nip7Q9CXK8 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nip7Q9CXK8 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC18.12■□□□□ 0.49
Nip7Q9CXK8 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC18.12■□□□□ 0.49
Nip7Q9CXK8 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nip7Q9CXK8 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nip7Q9CXK8 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Nip7Q9CXK8 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nip7Q9CXK8 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nip7Q9CXK8 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nip7Q9CXK8 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Nip7Q9CXK8 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nip7Q9CXK8 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nip7Q9CXK8 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Nip7Q9CXK8 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nip7Q9CXK8 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nip7Q9CXK8 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nip7Q9CXK8 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC18.11■□□□□ 0.49
Nip7Q9CXK8 Gm15393-201ENSMUST00000120499 219 ntBASIC18.11■□□□□ 0.49
Nip7Q9CXK8 Gm11918-201ENSMUST00000121660 179 ntBASIC18.11■□□□□ 0.49
Nip7Q9CXK8 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC18.11■□□□□ 0.49
Nip7Q9CXK8 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nip7Q9CXK8 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC18.11■□□□□ 0.49
Nip7Q9CXK8 Gm8602-201ENSMUST00000184045 607 ntBASIC18.11■□□□□ 0.49
Nip7Q9CXK8 Mir6392-201ENSMUST00000184924 108 ntBASIC18.11■□□□□ 0.49
Nip7Q9CXK8 AC154687.2-201ENSMUST00000223853 640 ntBASIC18.11■□□□□ 0.49
Nip7Q9CXK8 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nip7Q9CXK8 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nip7Q9CXK8 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nip7Q9CXK8 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nip7Q9CXK8 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nip7Q9CXK8 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nip7Q9CXK8 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nip7Q9CXK8 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Nip7Q9CXK8 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nip7Q9CXK8 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nip7Q9CXK8 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nip7Q9CXK8 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Nip7Q9CXK8 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nip7Q9CXK8 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nip7Q9CXK8 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nip7Q9CXK8 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Nip7Q9CXK8 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nip7Q9CXK8 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nip7Q9CXK8 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nip7Q9CXK8 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC18.1■□□□□ 0.49
Nip7Q9CXK8 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nip7Q9CXK8 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nip7Q9CXK8 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nip7Q9CXK8 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms