Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim11Q99PQ2 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
Trim11Q99PQ2 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim11Q99PQ2 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim11Q99PQ2 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trim11Q99PQ2 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim11Q99PQ2 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim11Q99PQ2 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim11Q99PQ2 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim11Q99PQ2 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim11Q99PQ2 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim11Q99PQ2 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim11Q99PQ2 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim11Q99PQ2 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim11Q99PQ2 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim11Q99PQ2 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim11Q99PQ2 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Trim11Q99PQ2 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim11Q99PQ2 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trim11Q99PQ2 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.67■□□□□ 0.26
Trim11Q99PQ2 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim11Q99PQ2 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim11Q99PQ2 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim11Q99PQ2 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim11Q99PQ2 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim11Q99PQ2 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trim11Q99PQ2 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trim11Q99PQ2 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim11Q99PQ2 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim11Q99PQ2 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim11Q99PQ2 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim11Q99PQ2 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Trim11Q99PQ2 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim11Q99PQ2 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim11Q99PQ2 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim11Q99PQ2 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim11Q99PQ2 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim11Q99PQ2 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim11Q99PQ2 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim11Q99PQ2 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim11Q99PQ2 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim11Q99PQ2 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trim11Q99PQ2 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.66■□□□□ 0.26
Trim11Q99PQ2 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim11Q99PQ2 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.66■□□□□ 0.26
Trim11Q99PQ2 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.66■□□□□ 0.26
Trim11Q99PQ2 Gm2451-201ENSMUST00000199447 999 ntBASIC16.66■□□□□ 0.26
Trim11Q99PQ2 Gm10290-201ENSMUST00000200451 999 ntBASIC16.66■□□□□ 0.26
Trim11Q99PQ2 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim11Q99PQ2 Psmb5-202ENSMUST00000227257 622 ntBASIC16.66■□□□□ 0.26
Trim11Q99PQ2 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim11Q99PQ2 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim11Q99PQ2 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim11Q99PQ2 Gm7461-201ENSMUST00000058918 827 ntBASIC16.66■□□□□ 0.26
Trim11Q99PQ2 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim11Q99PQ2 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim11Q99PQ2 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim11Q99PQ2 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim11Q99PQ2 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trim11Q99PQ2 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim11Q99PQ2 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim11Q99PQ2 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim11Q99PQ2 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim11Q99PQ2 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Trim11Q99PQ2 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.65■□□□□ 0.26
Trim11Q99PQ2 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim11Q99PQ2 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim11Q99PQ2 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim11Q99PQ2 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.65■□□□□ 0.26
Trim11Q99PQ2 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim11Q99PQ2 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trim11Q99PQ2 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim11Q99PQ2 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim11Q99PQ2 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim11Q99PQ2 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim11Q99PQ2 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.65■□□□□ 0.26
Trim11Q99PQ2 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim11Q99PQ2 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.65■□□□□ 0.26
Trim11Q99PQ2 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim11Q99PQ2 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim11Q99PQ2 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.65■□□□□ 0.26
Trim11Q99PQ2 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.65■□□□□ 0.26
Trim11Q99PQ2 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim11Q99PQ2 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim11Q99PQ2 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim11Q99PQ2 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim11Q99PQ2 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim11Q99PQ2 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim11Q99PQ2 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim11Q99PQ2 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim11Q99PQ2 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Trim11Q99PQ2 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim11Q99PQ2 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.65■□□□□ 0.26
Trim11Q99PQ2 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim11Q99PQ2 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim11Q99PQ2 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim11Q99PQ2 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim11Q99PQ2 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trim11Q99PQ2 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim11Q99PQ2 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms