Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.62□□□□□ -0.07
Cstf1Q99LC2 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cstf1Q99LC2 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cstf1Q99LC2 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cstf1Q99LC2 Rassf8-202ENSMUST00000058538 1131 ntBASIC14.62□□□□□ -0.07
Cstf1Q99LC2 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cstf1Q99LC2 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cstf1Q99LC2 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cstf1Q99LC2 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.62□□□□□ -0.07
Cstf1Q99LC2 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Cstf1Q99LC2 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cstf1Q99LC2 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cstf1Q99LC2 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cstf1Q99LC2 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cstf1Q99LC2 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Cstf1Q99LC2 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Cstf1Q99LC2 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cstf1Q99LC2 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cstf1Q99LC2 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cstf1Q99LC2 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.61□□□□□ -0.07
Cstf1Q99LC2 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cstf1Q99LC2 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.61□□□□□ -0.07
Cstf1Q99LC2 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cstf1Q99LC2 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cstf1Q99LC2 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cstf1Q99LC2 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cstf1Q99LC2 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cstf1Q99LC2 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cstf1Q99LC2 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.61□□□□□ -0.07
Cstf1Q99LC2 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cstf1Q99LC2 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cstf1Q99LC2 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.61□□□□□ -0.07
Cstf1Q99LC2 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cstf1Q99LC2 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cstf1Q99LC2 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Cstf1Q99LC2 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.61□□□□□ -0.07
Cstf1Q99LC2 Gm43703-201ENSMUST00000200523 763 ntBASIC14.61□□□□□ -0.07
Cstf1Q99LC2 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cstf1Q99LC2 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cstf1Q99LC2 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Cstf1Q99LC2 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cstf1Q99LC2 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cstf1Q99LC2 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cstf1Q99LC2 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cstf1Q99LC2 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cstf1Q99LC2 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cstf1Q99LC2 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cstf1Q99LC2 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cstf1Q99LC2 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Cstf1Q99LC2 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.6□□□□□ -0.07
Cstf1Q99LC2 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cstf1Q99LC2 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cstf1Q99LC2 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cstf1Q99LC2 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cstf1Q99LC2 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cstf1Q99LC2 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cstf1Q99LC2 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cstf1Q99LC2 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cstf1Q99LC2 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.6□□□□□ -0.07
Cstf1Q99LC2 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cstf1Q99LC2 Gm22189-201ENSMUST00000103822 86 ntBASIC14.6□□□□□ -0.07
Cstf1Q99LC2 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.6□□□□□ -0.07
Cstf1Q99LC2 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.6□□□□□ -0.07
Cstf1Q99LC2 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.6□□□□□ -0.07
Cstf1Q99LC2 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cstf1Q99LC2 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cstf1Q99LC2 Gm3436-201ENSMUST00000179930 840 ntBASIC14.6□□□□□ -0.07
Cstf1Q99LC2 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cstf1Q99LC2 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cstf1Q99LC2 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cstf1Q99LC2 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cstf1Q99LC2 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cstf1Q99LC2 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cstf1Q99LC2 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cstf1Q99LC2 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cstf1Q99LC2 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Cstf1Q99LC2 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cstf1Q99LC2 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cstf1Q99LC2 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Cstf1Q99LC2 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cstf1Q99LC2 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cstf1Q99LC2 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cstf1Q99LC2 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cstf1Q99LC2 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cstf1Q99LC2 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.59□□□□□ -0.07
Cstf1Q99LC2 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cstf1Q99LC2 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Cstf1Q99LC2 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cstf1Q99LC2 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cstf1Q99LC2 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cstf1Q99LC2 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cstf1Q99LC2 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.59□□□□□ -0.07
Cstf1Q99LC2 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cstf1Q99LC2 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC14.59□□□□□ -0.07
Cstf1Q99LC2 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cstf1Q99LC2 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.59□□□□□ -0.07
Cstf1Q99LC2 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.59□□□□□ -0.07
Cstf1Q99LC2 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.59□□□□□ -0.07
Cstf1Q99LC2 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cstf1Q99LC2 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms