Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb5Q91XZ5 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb5Q91XZ5 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb5Q91XZ5 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb5Q91XZ5 BC037039-201ENSMUST00000192003 2205 ntBASIC17.19■□□□□ 0.34
Pcdhb5Q91XZ5 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb5Q91XZ5 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhb5Q91XZ5 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Pcdhb5Q91XZ5 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb5Q91XZ5 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdhb5Q91XZ5 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Pcdhb5Q91XZ5 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhb5Q91XZ5 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdhb5Q91XZ5 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb5Q91XZ5 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb5Q91XZ5 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhb5Q91XZ5 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhb5Q91XZ5 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb5Q91XZ5 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb5Q91XZ5 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb5Q91XZ5 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb5Q91XZ5 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb5Q91XZ5 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdhb5Q91XZ5 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb5Q91XZ5 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb5Q91XZ5 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb5Q91XZ5 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhb5Q91XZ5 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb5Q91XZ5 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhb5Q91XZ5 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb5Q91XZ5 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdhb5Q91XZ5 Gm12490-201ENSMUST00000120255 560 ntBASIC17.18■□□□□ 0.34
Pcdhb5Q91XZ5 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC17.18■□□□□ 0.34
Pcdhb5Q91XZ5 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Pcdhb5Q91XZ5 Gm42612-201ENSMUST00000197986 623 ntBASIC17.18■□□□□ 0.34
Pcdhb5Q91XZ5 Gm43170-201ENSMUST00000199827 612 ntBASIC17.18■□□□□ 0.34
Pcdhb5Q91XZ5 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb5Q91XZ5 AC156016.3-201ENSMUST00000228623 344 ntBASIC17.18■□□□□ 0.34
Pcdhb5Q91XZ5 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb5Q91XZ5 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb5Q91XZ5 Hist1h2al-201ENSMUST00000091708 339 ntBASIC17.18■□□□□ 0.34
Pcdhb5Q91XZ5 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb5Q91XZ5 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdhb5Q91XZ5 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb5Q91XZ5 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb5Q91XZ5 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhb5Q91XZ5 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb5Q91XZ5 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb5Q91XZ5 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhb5Q91XZ5 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb5Q91XZ5 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17.17■□□□□ 0.34
Pcdhb5Q91XZ5 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb5Q91XZ5 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb5Q91XZ5 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhb5Q91XZ5 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb5Q91XZ5 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb5Q91XZ5 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb5Q91XZ5 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb5Q91XZ5 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb5Q91XZ5 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb5Q91XZ5 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC17.17■□□□□ 0.34
Pcdhb5Q91XZ5 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb5Q91XZ5 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb5Q91XZ5 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb5Q91XZ5 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb5Q91XZ5 Gm28631-201ENSMUST00000190740 334 ntBASIC17.17■□□□□ 0.34
Pcdhb5Q91XZ5 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb5Q91XZ5 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhb5Q91XZ5 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhb5Q91XZ5 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Pcdhb5Q91XZ5 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Pcdhb5Q91XZ5 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb5Q91XZ5 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Pcdhb5Q91XZ5 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb5Q91XZ5 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb5Q91XZ5 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb5Q91XZ5 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhb5Q91XZ5 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb5Q91XZ5 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb5Q91XZ5 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb5Q91XZ5 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb5Q91XZ5 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb5Q91XZ5 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb5Q91XZ5 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb5Q91XZ5 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.16■□□□□ 0.34
Pcdhb5Q91XZ5 Gm22189-201ENSMUST00000103822 86 ntBASIC17.16■□□□□ 0.34
Pcdhb5Q91XZ5 AC123645.1-201ENSMUST00000228469 605 ntBASIC17.16■□□□□ 0.34
Pcdhb5Q91XZ5 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhb5Q91XZ5 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb5Q91XZ5 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhb5Q91XZ5 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC17.16■□□□□ 0.34
Pcdhb5Q91XZ5 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Pcdhb5Q91XZ5 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb5Q91XZ5 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb5Q91XZ5 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb5Q91XZ5 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb5Q91XZ5 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb5Q91XZ5 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb5Q91XZ5 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb5Q91XZ5 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms