Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb6Q91XZ4 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb6Q91XZ4 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb6Q91XZ4 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.03■□□□□ -0
Pcdhb6Q91XZ4 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb6Q91XZ4 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb6Q91XZ4 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Pcdhb6Q91XZ4 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.03■□□□□ -0
Pcdhb6Q91XZ4 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb6Q91XZ4 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Pcdhb6Q91XZ4 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb6Q91XZ4 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Pcdhb6Q91XZ4 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.02■□□□□ -0
Pcdhb6Q91XZ4 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb6Q91XZ4 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb6Q91XZ4 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.02■□□□□ -0
Pcdhb6Q91XZ4 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb6Q91XZ4 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb6Q91XZ4 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Pcdhb6Q91XZ4 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Pcdhb6Q91XZ4 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb6Q91XZ4 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Pcdhb6Q91XZ4 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb6Q91XZ4 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb6Q91XZ4 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb6Q91XZ4 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.02■□□□□ -0
Pcdhb6Q91XZ4 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb6Q91XZ4 Gm11025-201ENSMUST00000140773 466 ntBASIC15.02■□□□□ -0
Pcdhb6Q91XZ4 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.02■□□□□ -0
Pcdhb6Q91XZ4 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb6Q91XZ4 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.02■□□□□ -0
Pcdhb6Q91XZ4 Gm8000-201ENSMUST00000188378 592 ntBASIC15.02■□□□□ -0
Pcdhb6Q91XZ4 Gm43514-201ENSMUST00000198852 424 ntBASIC15.02■□□□□ -0
Pcdhb6Q91XZ4 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb6Q91XZ4 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.02■□□□□ -0
Pcdhb6Q91XZ4 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb6Q91XZ4 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb6Q91XZ4 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb6Q91XZ4 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb6Q91XZ4 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb6Q91XZ4 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Pcdhb6Q91XZ4 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.02□□□□□ -0.01
Pcdhb6Q91XZ4 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.02□□□□□ -0.01
Pcdhb6Q91XZ4 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.02□□□□□ -0.01
Pcdhb6Q91XZ4 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb6Q91XZ4 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb6Q91XZ4 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb6Q91XZ4 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.02□□□□□ -0.01
Pcdhb6Q91XZ4 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb6Q91XZ4 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb6Q91XZ4 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb6Q91XZ4 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Pcdhb6Q91XZ4 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdhb6Q91XZ4 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdhb6Q91XZ4 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb6Q91XZ4 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Pcdhb6Q91XZ4 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb6Q91XZ4 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb6Q91XZ4 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Pcdhb6Q91XZ4 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb6Q91XZ4 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Pcdhb6Q91XZ4 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb6Q91XZ4 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb6Q91XZ4 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb6Q91XZ4 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.01□□□□□ -0.01
Pcdhb6Q91XZ4 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.01□□□□□ -0.01
Pcdhb6Q91XZ4 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Pcdhb6Q91XZ4 Gm25911-201ENSMUST00000157621 56 ntBASIC15.01□□□□□ -0.01
Pcdhb6Q91XZ4 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.01□□□□□ -0.01
Pcdhb6Q91XZ4 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb6Q91XZ4 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Pcdhb6Q91XZ4 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.01□□□□□ -0.01
Pcdhb6Q91XZ4 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb6Q91XZ4 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb6Q91XZ4 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb6Q91XZ4 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb6Q91XZ4 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb6Q91XZ4 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb6Q91XZ4 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Pcdhb6Q91XZ4 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb6Q91XZ4 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb6Q91XZ4 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb6Q91XZ4 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb6Q91XZ4 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb6Q91XZ4 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb6Q91XZ4 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15□□□□□ -0.01
Pcdhb6Q91XZ4 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb6Q91XZ4 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb6Q91XZ4 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb6Q91XZ4 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb6Q91XZ4 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Pcdhb6Q91XZ4 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb6Q91XZ4 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb6Q91XZ4 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15□□□□□ -0.01
Pcdhb6Q91XZ4 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb6Q91XZ4 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15□□□□□ -0.01
Pcdhb6Q91XZ4 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb6Q91XZ4 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb6Q91XZ4 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15□□□□□ -0.01
Pcdhb6Q91XZ4 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms