Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga3Q91XY5 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga3Q91XY5 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga3Q91XY5 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.06□□□□□ -0.32
Pcdhga3Q91XY5 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.06□□□□□ -0.32
Pcdhga3Q91XY5 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga3Q91XY5 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga3Q91XY5 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.06□□□□□ -0.32
Pcdhga3Q91XY5 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.06□□□□□ -0.32
Pcdhga3Q91XY5 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.06□□□□□ -0.32
Pcdhga3Q91XY5 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Pcdhga3Q91XY5 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga3Q91XY5 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga3Q91XY5 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga3Q91XY5 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga3Q91XY5 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Pcdhga3Q91XY5 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga3Q91XY5 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga3Q91XY5 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga3Q91XY5 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga3Q91XY5 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga3Q91XY5 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga3Q91XY5 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 Gm27300-201ENSMUST00000184085 97 ntBASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 Gm27335-201ENSMUST00000184758 97 ntBASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Pcdhga3Q91XY5 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga3Q91XY5 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Pcdhga3Q91XY5 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.04□□□□□ -0.32
Pcdhga3Q91XY5 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga3Q91XY5 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Pcdhga3Q91XY5 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhga3Q91XY5 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga3Q91XY5 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhga3Q91XY5 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga3Q91XY5 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Pcdhga3Q91XY5 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.04□□□□□ -0.32
Pcdhga3Q91XY5 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga3Q91XY5 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhga3Q91XY5 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.04□□□□□ -0.32
Pcdhga3Q91XY5 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.04□□□□□ -0.32
Pcdhga3Q91XY5 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.04□□□□□ -0.32
Pcdhga3Q91XY5 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.04□□□□□ -0.32
Pcdhga3Q91XY5 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga3Q91XY5 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.04□□□□□ -0.32
Pcdhga3Q91XY5 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdhga3Q91XY5 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga3Q91XY5 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.04□□□□□ -0.32
Pcdhga3Q91XY5 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga3Q91XY5 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga3Q91XY5 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga3Q91XY5 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga3Q91XY5 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga3Q91XY5 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga3Q91XY5 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga3Q91XY5 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga3Q91XY5 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga3Q91XY5 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga3Q91XY5 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhga3Q91XY5 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms