Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tram1Q91V04 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.6□□□□□ -0.39
Tram1Q91V04 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tram1Q91V04 Mir3081-201ENSMUST00000175305 84 ntBASIC12.6□□□□□ -0.39
Tram1Q91V04 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Tram1Q91V04 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.6□□□□□ -0.39
Tram1Q91V04 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.6□□□□□ -0.39
Tram1Q91V04 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tram1Q91V04 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Tram1Q91V04 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tram1Q91V04 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tram1Q91V04 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tram1Q91V04 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tram1Q91V04 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tram1Q91V04 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Tram1Q91V04 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tram1Q91V04 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.6□□□□□ -0.39
Tram1Q91V04 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Tram1Q91V04 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tram1Q91V04 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Tram1Q91V04 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tram1Q91V04 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tram1Q91V04 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Tram1Q91V04 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tram1Q91V04 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Tram1Q91V04 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tram1Q91V04 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tram1Q91V04 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tram1Q91V04 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tram1Q91V04 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tram1Q91V04 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tram1Q91V04 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Tram1Q91V04 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tram1Q91V04 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tram1Q91V04 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tram1Q91V04 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.59□□□□□ -0.39
Tram1Q91V04 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Tram1Q91V04 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tram1Q91V04 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tram1Q91V04 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tram1Q91V04 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.59□□□□□ -0.39
Tram1Q91V04 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Tram1Q91V04 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.59□□□□□ -0.39
Tram1Q91V04 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tram1Q91V04 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.59□□□□□ -0.39
Tram1Q91V04 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tram1Q91V04 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Tram1Q91V04 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tram1Q91V04 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tram1Q91V04 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tram1Q91V04 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tram1Q91V04 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tram1Q91V04 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tram1Q91V04 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tram1Q91V04 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tram1Q91V04 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tram1Q91V04 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tram1Q91V04 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Tram1Q91V04 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tram1Q91V04 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tram1Q91V04 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tram1Q91V04 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tram1Q91V04 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.59□□□□□ -0.39
Tram1Q91V04 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.59□□□□□ -0.39
Tram1Q91V04 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.59□□□□□ -0.39
Tram1Q91V04 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Tram1Q91V04 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.58□□□□□ -0.39
Tram1Q91V04 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.58□□□□□ -0.39
Tram1Q91V04 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Tram1Q91V04 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.58□□□□□ -0.39
Tram1Q91V04 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Tram1Q91V04 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Tram1Q91V04 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tram1Q91V04 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tram1Q91V04 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tram1Q91V04 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tram1Q91V04 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tram1Q91V04 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tram1Q91V04 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tram1Q91V04 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.58□□□□□ -0.4
Tram1Q91V04 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Tram1Q91V04 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Tram1Q91V04 Gm8655-201ENSMUST00000221159 852 ntBASIC12.58□□□□□ -0.4
Tram1Q91V04 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tram1Q91V04 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tram1Q91V04 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Tram1Q91V04 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tram1Q91V04 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tram1Q91V04 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tram1Q91V04 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tram1Q91V04 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tram1Q91V04 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tram1Q91V04 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Tram1Q91V04 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tram1Q91V04 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tram1Q91V04 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tram1Q91V04 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.57□□□□□ -0.4
Tram1Q91V04 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tram1Q91V04 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tram1Q91V04 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms