Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Q8VDP2 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Q8VDP2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Q8VDP2 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Q8VDP2 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Q8VDP2 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Q8VDP2 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Q8VDP2 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Q8VDP2 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Q8VDP2 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Q8VDP2 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Q8VDP2 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Q8VDP2 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Q8VDP2 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Q8VDP2 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Q8VDP2 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Q8VDP2 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Q8VDP2 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Q8VDP2 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Q8VDP2 Mir2861-201ENSMUST00000175539 82 ntBASIC14.32□□□□□ -0.12
Q8VDP2 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.32□□□□□ -0.12
Q8VDP2 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Q8VDP2 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Q8VDP2 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Q8VDP2 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Q8VDP2 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Q8VDP2 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Q8VDP2 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Q8VDP2 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Q8VDP2 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Q8VDP2 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.32□□□□□ -0.12
Q8VDP2 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Q8VDP2 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Q8VDP2 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC14.32□□□□□ -0.12
Q8VDP2 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Q8VDP2 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Q8VDP2 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Q8VDP2 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Q8VDP2 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.31□□□□□ -0.12
Q8VDP2 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.31□□□□□ -0.12
Q8VDP2 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Q8VDP2 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.31□□□□□ -0.12
Q8VDP2 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Q8VDP2 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Q8VDP2 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.31□□□□□ -0.12
Q8VDP2 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Q8VDP2 Gm10231-201ENSMUST00000181584 441 ntBASIC14.31□□□□□ -0.12
Q8VDP2 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Q8VDP2 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Q8VDP2 Gm10175-202ENSMUST00000208752 441 ntBASIC14.31□□□□□ -0.12
Q8VDP2 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Q8VDP2 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Q8VDP2 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Q8VDP2 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Q8VDP2 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Q8VDP2 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Q8VDP2 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Q8VDP2 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.31□□□□□ -0.12
Q8VDP2 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Q8VDP2 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Q8VDP2 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Q8VDP2 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Q8VDP2 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.31□□□□□ -0.12
Q8VDP2 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Q8VDP2 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Q8VDP2 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Q8VDP2 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Q8VDP2 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.3□□□□□ -0.12
Q8VDP2 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Q8VDP2 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Q8VDP2 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Q8VDP2 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.3□□□□□ -0.12
Q8VDP2 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Q8VDP2 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.3□□□□□ -0.12
Q8VDP2 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.3□□□□□ -0.12
Q8VDP2 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Q8VDP2 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Q8VDP2 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Q8VDP2 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Q8VDP2 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Q8VDP2 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Q8VDP2 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Q8VDP2 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.3□□□□□ -0.12
Q8VDP2 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Q8VDP2 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.3□□□□□ -0.12
Q8VDP2 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Q8VDP2 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Q8VDP2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Q8VDP2 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Q8VDP2 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Q8VDP2 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Q8VDP2 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q8VDP2 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q8VDP2 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q8VDP2 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q8VDP2 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Q8VDP2 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Q8VDP2 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Q8VDP2 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q8VDP2 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms