Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Alx1Q8C8B0 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Alx1Q8C8B0 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Alx1Q8C8B0 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Alx1Q8C8B0 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Alx1Q8C8B0 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Alx1Q8C8B0 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.04■□□□□ 0.32
Alx1Q8C8B0 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.04■□□□□ 0.32
Alx1Q8C8B0 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Alx1Q8C8B0 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Alx1Q8C8B0 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Alx1Q8C8B0 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Alx1Q8C8B0 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Alx1Q8C8B0 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Alx1Q8C8B0 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Alx1Q8C8B0 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Alx1Q8C8B0 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Alx1Q8C8B0 BC001981-202ENSMUST00000191393 1545 ntBASIC17.03■□□□□ 0.32
Alx1Q8C8B0 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC17.03■□□□□ 0.32
Alx1Q8C8B0 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Alx1Q8C8B0 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.03■□□□□ 0.32
Alx1Q8C8B0 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC17.03■□□□□ 0.32
Alx1Q8C8B0 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Alx1Q8C8B0 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Alx1Q8C8B0 Gm25144-201ENSMUST00000179561 110 ntBASIC17.03■□□□□ 0.32
Alx1Q8C8B0 Gm25352-201ENSMUST00000179815 110 ntBASIC17.03■□□□□ 0.32
Alx1Q8C8B0 Gm44872-201ENSMUST00000207864 420 ntBASIC17.03■□□□□ 0.32
Alx1Q8C8B0 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Alx1Q8C8B0 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Alx1Q8C8B0 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Alx1Q8C8B0 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Alx1Q8C8B0 Gm44981-201ENSMUST00000205549 1943 ntBASIC17.03■□□□□ 0.32
Alx1Q8C8B0 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Alx1Q8C8B0 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Alx1Q8C8B0 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Alx1Q8C8B0 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Alx1Q8C8B0 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Alx1Q8C8B0 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Alx1Q8C8B0 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Alx1Q8C8B0 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Alx1Q8C8B0 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Alx1Q8C8B0 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
Alx1Q8C8B0 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Alx1Q8C8B0 Gm10605-202ENSMUST00000183019 3198 ntBASIC17.02■□□□□ 0.32
Alx1Q8C8B0 Gm5763-201ENSMUST00000155951 1530 ntBASIC17.02■□□□□ 0.32
Alx1Q8C8B0 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Alx1Q8C8B0 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Alx1Q8C8B0 Gm12882-201ENSMUST00000121696 517 ntBASIC17.02■□□□□ 0.32
Alx1Q8C8B0 Gm12134-201ENSMUST00000122109 520 ntBASIC17.02■□□□□ 0.32
Alx1Q8C8B0 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC17.02■□□□□ 0.32
Alx1Q8C8B0 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Alx1Q8C8B0 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC17.02■□□□□ 0.32
Alx1Q8C8B0 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC17.02■□□□□ 0.32
Alx1Q8C8B0 Gm45453-201ENSMUST00000211758 853 ntBASIC17.02■□□□□ 0.32
Alx1Q8C8B0 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.02■□□□□ 0.32
Alx1Q8C8B0 AC149588.3-201ENSMUST00000227515 150 ntBASIC17.02■□□□□ 0.32
Alx1Q8C8B0 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.02■□□□□ 0.32
Alx1Q8C8B0 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Alx1Q8C8B0 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.02■□□□□ 0.32
Alx1Q8C8B0 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Alx1Q8C8B0 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Alx1Q8C8B0 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Alx1Q8C8B0 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.31
Alx1Q8C8B0 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Alx1Q8C8B0 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Alx1Q8C8B0 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
Alx1Q8C8B0 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Alx1Q8C8B0 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Alx1Q8C8B0 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alx1Q8C8B0 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alx1Q8C8B0 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alx1Q8C8B0 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alx1Q8C8B0 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Alx1Q8C8B0 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alx1Q8C8B0 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alx1Q8C8B0 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alx1Q8C8B0 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alx1Q8C8B0 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alx1Q8C8B0 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Alx1Q8C8B0 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.01■□□□□ 0.31
Alx1Q8C8B0 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alx1Q8C8B0 Gm27533-201ENSMUST00000183800 152 ntBASIC17.01■□□□□ 0.31
Alx1Q8C8B0 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Alx1Q8C8B0 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Alx1Q8C8B0 Gm16476-201ENSMUST00000221544 139 ntBASIC17.01■□□□□ 0.31
Alx1Q8C8B0 AC102291.3-201ENSMUST00000226566 405 ntBASIC17.01■□□□□ 0.31
Alx1Q8C8B0 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alx1Q8C8B0 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Alx1Q8C8B0 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alx1Q8C8B0 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alx1Q8C8B0 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Alx1Q8C8B0 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Alx1Q8C8B0 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alx1Q8C8B0 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alx1Q8C8B0 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alx1Q8C8B0 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alx1Q8C8B0 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alx1Q8C8B0 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alx1Q8C8B0 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Alx1Q8C8B0 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms