Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc60Q8C4J0 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc60Q8C4J0 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc60Q8C4J0 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc60Q8C4J0 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc60Q8C4J0 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc60Q8C4J0 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Ccdc60Q8C4J0 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc60Q8C4J0 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ccdc60Q8C4J0 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc60Q8C4J0 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc60Q8C4J0 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc60Q8C4J0 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc60Q8C4J0 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc60Q8C4J0 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC18.65■□□□□ 0.58
Ccdc60Q8C4J0 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC18.65■□□□□ 0.58
Ccdc60Q8C4J0 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC18.65■□□□□ 0.58
Ccdc60Q8C4J0 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC18.65■□□□□ 0.58
Ccdc60Q8C4J0 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC18.65■□□□□ 0.58
Ccdc60Q8C4J0 Gm43125-201ENSMUST00000201724 730 ntBASIC18.65■□□□□ 0.58
Ccdc60Q8C4J0 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC18.65■□□□□ 0.58
Ccdc60Q8C4J0 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
Ccdc60Q8C4J0 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc60Q8C4J0 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc60Q8C4J0 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Ccdc60Q8C4J0 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ccdc60Q8C4J0 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ccdc60Q8C4J0 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ccdc60Q8C4J0 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Ccdc60Q8C4J0 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc60Q8C4J0 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc60Q8C4J0 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc60Q8C4J0 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ccdc60Q8C4J0 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Ccdc60Q8C4J0 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Ccdc60Q8C4J0 Fbxl12-205ENSMUST00000140702 1555 ntBASIC18.64■□□□□ 0.58
Ccdc60Q8C4J0 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc60Q8C4J0 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc60Q8C4J0 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc60Q8C4J0 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc60Q8C4J0 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc60Q8C4J0 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
Ccdc60Q8C4J0 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc60Q8C4J0 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc60Q8C4J0 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc60Q8C4J0 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC18.64■□□□□ 0.57
Ccdc60Q8C4J0 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC18.64■□□□□ 0.57
Ccdc60Q8C4J0 Gm43474-201ENSMUST00000196415 774 ntBASIC18.64■□□□□ 0.57
Ccdc60Q8C4J0 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc60Q8C4J0 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc60Q8C4J0 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc60Q8C4J0 Gm42934-201ENSMUST00000196920 1345 ntBASIC18.64■□□□□ 0.57
Ccdc60Q8C4J0 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
Ccdc60Q8C4J0 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ccdc60Q8C4J0 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Ccdc60Q8C4J0 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc60Q8C4J0 Gm9856-201ENSMUST00000217077 2578 ntBASIC18.64■□□□□ 0.57
Ccdc60Q8C4J0 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc60Q8C4J0 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ccdc60Q8C4J0 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc60Q8C4J0 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc60Q8C4J0 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc60Q8C4J0 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc60Q8C4J0 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Ccdc60Q8C4J0 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc60Q8C4J0 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc60Q8C4J0 Gm38058-201ENSMUST00000194323 4368 ntBASIC18.63■□□□□ 0.57
Ccdc60Q8C4J0 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc60Q8C4J0 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc60Q8C4J0 Gm44443-201ENSMUST00000204396 5633 ntBASIC18.63■□□□□ 0.57
Ccdc60Q8C4J0 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc60Q8C4J0 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc60Q8C4J0 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC18.63■□□□□ 0.57
Ccdc60Q8C4J0 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc60Q8C4J0 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Ccdc60Q8C4J0 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc60Q8C4J0 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc60Q8C4J0 Gm18737-201ENSMUST00000173594 937 ntBASIC18.63■□□□□ 0.57
Ccdc60Q8C4J0 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc60Q8C4J0 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC18.63■□□□□ 0.57
Ccdc60Q8C4J0 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Ccdc60Q8C4J0 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Ccdc60Q8C4J0 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Ccdc60Q8C4J0 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc60Q8C4J0 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc60Q8C4J0 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc60Q8C4J0 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC18.63■□□□□ 0.57
Ccdc60Q8C4J0 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Ccdc60Q8C4J0 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Ccdc60Q8C4J0 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC18.63■□□□□ 0.57
Ccdc60Q8C4J0 Gm6756-201ENSMUST00000180647 1620 ntBASIC18.63■□□□□ 0.57
Ccdc60Q8C4J0 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc60Q8C4J0 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc60Q8C4J0 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc60Q8C4J0 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc60Q8C4J0 Gm26308-201ENSMUST00000157768 69 ntBASIC18.62■□□□□ 0.57
Ccdc60Q8C4J0 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC18.62■□□□□ 0.57
Ccdc60Q8C4J0 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc60Q8C4J0 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc60Q8C4J0 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms