Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Col7a1Q63870 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col7a1Q63870 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col7a1Q63870 Gm12217-201ENSMUST00000118858 696 ntBASIC11.83□□□□□ -0.52
Col7a1Q63870 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC11.83□□□□□ -0.52
Col7a1Q63870 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.83□□□□□ -0.52
Col7a1Q63870 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col7a1Q63870 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col7a1Q63870 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Col7a1Q63870 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col7a1Q63870 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Col7a1Q63870 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC11.83□□□□□ -0.52
Col7a1Q63870 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Col7a1Q63870 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Col7a1Q63870 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col7a1Q63870 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.83□□□□□ -0.52
Col7a1Q63870 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col7a1Q63870 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col7a1Q63870 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col7a1Q63870 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col7a1Q63870 Gm27023-201ENSMUST00000182372 285 ntBASIC11.83□□□□□ -0.52
Col7a1Q63870 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.83□□□□□ -0.52
Col7a1Q63870 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.83□□□□□ -0.52
Col7a1Q63870 Morn2-202ENSMUST00000227729 656 ntBASIC11.83□□□□□ -0.52
Col7a1Q63870 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.83□□□□□ -0.52
Col7a1Q63870 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Col7a1Q63870 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col7a1Q63870 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col7a1Q63870 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col7a1Q63870 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col7a1Q63870 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Col7a1Q63870 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col7a1Q63870 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col7a1Q63870 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC11.82□□□□□ -0.52
Col7a1Q63870 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.82□□□□□ -0.52
Col7a1Q63870 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col7a1Q63870 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col7a1Q63870 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col7a1Q63870 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col7a1Q63870 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col7a1Q63870 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col7a1Q63870 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col7a1Q63870 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col7a1Q63870 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col7a1Q63870 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col7a1Q63870 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col7a1Q63870 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col7a1Q63870 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC11.82□□□□□ -0.52
Col7a1Q63870 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.82□□□□□ -0.52
Col7a1Q63870 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col7a1Q63870 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col7a1Q63870 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col7a1Q63870 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col7a1Q63870 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col7a1Q63870 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Col7a1Q63870 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col7a1Q63870 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Col7a1Q63870 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col7a1Q63870 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Col7a1Q63870 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col7a1Q63870 Gm45219-201ENSMUST00000205602 465 ntBASIC11.81□□□□□ -0.52
Col7a1Q63870 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col7a1Q63870 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col7a1Q63870 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col7a1Q63870 Gm6598-201ENSMUST00000202719 2615 ntBASIC11.81□□□□□ -0.52
Col7a1Q63870 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col7a1Q63870 Gm43702-201ENSMUST00000198772 2546 ntBASIC11.81□□□□□ -0.52
Col7a1Q63870 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col7a1Q63870 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col7a1Q63870 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col7a1Q63870 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col7a1Q63870 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC11.81□□□□□ -0.52
Col7a1Q63870 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col7a1Q63870 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col7a1Q63870 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col7a1Q63870 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.81□□□□□ -0.52
Col7a1Q63870 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col7a1Q63870 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col7a1Q63870 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col7a1Q63870 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC11.81□□□□□ -0.52
Col7a1Q63870 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col7a1Q63870 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col7a1Q63870 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col7a1Q63870 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col7a1Q63870 App-207ENSMUST00000227737 2827 ntBASIC11.81□□□□□ -0.52
Col7a1Q63870 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col7a1Q63870 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col7a1Q63870 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC11.8□□□□□ -0.52
Col7a1Q63870 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.8□□□□□ -0.52
Col7a1Q63870 Gm6222-202ENSMUST00000182143 629 ntBASIC11.8□□□□□ -0.52
Col7a1Q63870 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col7a1Q63870 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Col7a1Q63870 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col7a1Q63870 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col7a1Q63870 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col7a1Q63870 Ntrk2-205ENSMUST00000224402 2284 ntBASIC11.8□□□□□ -0.52
Col7a1Q63870 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.8□□□□□ -0.52
Col7a1Q63870 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col7a1Q63870 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Col7a1Q63870 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms