Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vsx2Q61412 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx2Q61412 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx2Q61412 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx2Q61412 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx2Q61412 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Vsx2Q61412 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Vsx2Q61412 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx2Q61412 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Vsx2Q61412 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx2Q61412 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx2Q61412 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx2Q61412 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Vsx2Q61412 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx2Q61412 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Vsx2Q61412 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx2Q61412 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx2Q61412 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Vsx2Q61412 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx2Q61412 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.28□□□□□ -0.12
Vsx2Q61412 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.28□□□□□ -0.12
Vsx2Q61412 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx2Q61412 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx2Q61412 Gm6736-201ENSMUST00000166583 948 ntBASIC14.28□□□□□ -0.12
Vsx2Q61412 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx2Q61412 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.28□□□□□ -0.12
Vsx2Q61412 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.28□□□□□ -0.12
Vsx2Q61412 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx2Q61412 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Vsx2Q61412 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx2Q61412 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.28□□□□□ -0.12
Vsx2Q61412 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Vsx2Q61412 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.28□□□□□ -0.12
Vsx2Q61412 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Vsx2Q61412 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx2Q61412 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx2Q61412 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx2Q61412 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx2Q61412 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx2Q61412 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx2Q61412 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx2Q61412 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx2Q61412 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx2Q61412 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx2Q61412 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx2Q61412 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Vsx2Q61412 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx2Q61412 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx2Q61412 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.28□□□□□ -0.12
Vsx2Q61412 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vsx2Q61412 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vsx2Q61412 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vsx2Q61412 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.27□□□□□ -0.12
Vsx2Q61412 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vsx2Q61412 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.27□□□□□ -0.12
Vsx2Q61412 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vsx2Q61412 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.27□□□□□ -0.12
Vsx2Q61412 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
Vsx2Q61412 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vsx2Q61412 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vsx2Q61412 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.27□□□□□ -0.12
Vsx2Q61412 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vsx2Q61412 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
Vsx2Q61412 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Vsx2Q61412 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vsx2Q61412 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Vsx2Q61412 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.27□□□□□ -0.13
Vsx2Q61412 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Vsx2Q61412 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vsx2Q61412 Gm2756-201ENSMUST00000195851 400 ntBASIC14.27□□□□□ -0.13
Vsx2Q61412 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vsx2Q61412 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vsx2Q61412 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vsx2Q61412 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vsx2Q61412 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vsx2Q61412 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vsx2Q61412 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Vsx2Q61412 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vsx2Q61412 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vsx2Q61412 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vsx2Q61412 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vsx2Q61412 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Vsx2Q61412 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vsx2Q61412 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vsx2Q61412 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.27□□□□□ -0.13
Vsx2Q61412 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vsx2Q61412 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vsx2Q61412 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vsx2Q61412 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vsx2Q61412 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Vsx2Q61412 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Vsx2Q61412 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vsx2Q61412 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Vsx2Q61412 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.26□□□□□ -0.13
Vsx2Q61412 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.26□□□□□ -0.13
Vsx2Q61412 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.26□□□□□ -0.13
Vsx2Q61412 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vsx2Q61412 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vsx2Q61412 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Vsx2Q61412 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms