Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mre11Q61216 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mre11Q61216 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mre11Q61216 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mre11Q61216 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Mre11Q61216 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mre11Q61216 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mre11Q61216 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mre11Q61216 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mre11Q61216 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mre11Q61216 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Mre11Q61216 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mre11Q61216 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mre11Q61216 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC17.54■□□□□ 0.4
Mre11Q61216 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Mre11Q61216 Mir770-201ENSMUST00000103252 94 ntBASIC17.54■□□□□ 0.4
Mre11Q61216 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.54■□□□□ 0.4
Mre11Q61216 Gm45058-201ENSMUST00000205810 766 ntBASIC17.54■□□□□ 0.4
Mre11Q61216 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.54■□□□□ 0.4
Mre11Q61216 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.54■□□□□ 0.4
Mre11Q61216 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Mre11Q61216 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mre11Q61216 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC17.54■□□□□ 0.4
Mre11Q61216 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC17.54■□□□□ 0.4
Mre11Q61216 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mre11Q61216 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mre11Q61216 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mre11Q61216 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mre11Q61216 Gm37644-201ENSMUST00000192190 2270 ntBASIC17.54■□□□□ 0.4
Mre11Q61216 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Mre11Q61216 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC17.53■□□□□ 0.4
Mre11Q61216 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mre11Q61216 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Mre11Q61216 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC17.53■□□□□ 0.4
Mre11Q61216 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Mre11Q61216 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC17.53■□□□□ 0.4
Mre11Q61216 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mre11Q61216 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Mre11Q61216 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mre11Q61216 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Mre11Q61216 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mre11Q61216 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.53■□□□□ 0.4
Mre11Q61216 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Mre11Q61216 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.53■□□□□ 0.4
Mre11Q61216 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.53■□□□□ 0.4
Mre11Q61216 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Mre11Q61216 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Mre11Q61216 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mre11Q61216 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Mre11Q61216 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Mre11Q61216 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mre11Q61216 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mre11Q61216 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Mre11Q61216 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mre11Q61216 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mre11Q61216 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mre11Q61216 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mre11Q61216 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC17.52■□□□□ 0.4
Mre11Q61216 Grk6-205ENSMUST00000224653 2976 ntBASIC17.52■□□□□ 0.4
Mre11Q61216 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mre11Q61216 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mre11Q61216 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Mre11Q61216 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mre11Q61216 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mre11Q61216 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mre11Q61216 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Mre11Q61216 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Mre11Q61216 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Mre11Q61216 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Mre11Q61216 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC17.52■□□□□ 0.4
Mre11Q61216 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Mre11Q61216 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC17.52■□□□□ 0.4
Mre11Q61216 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.52■□□□□ 0.4
Mre11Q61216 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Mre11Q61216 Gm18622-201ENSMUST00000219361 595 ntBASIC17.52■□□□□ 0.4
Mre11Q61216 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mre11Q61216 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mre11Q61216 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Mre11Q61216 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mre11Q61216 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Mre11Q61216 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.39
Mre11Q61216 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mre11Q61216 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Mre11Q61216 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Mre11Q61216 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mre11Q61216 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC17.51■□□□□ 0.39
Mre11Q61216 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC17.51■□□□□ 0.39
Mre11Q61216 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
Mre11Q61216 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Mre11Q61216 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mre11Q61216 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mre11Q61216 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mre11Q61216 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mre11Q61216 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Mre11Q61216 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Mre11Q61216 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Mre11Q61216 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Mre11Q61216 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Mre11Q61216 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Mre11Q61216 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms