Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClpbQ60649 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ClpbQ60649 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClpbQ60649 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.06□□□□□ -0.16
ClpbQ60649 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.06□□□□□ -0.16
ClpbQ60649 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
ClpbQ60649 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.06□□□□□ -0.16
ClpbQ60649 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.06□□□□□ -0.16
ClpbQ60649 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClpbQ60649 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ClpbQ60649 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.06□□□□□ -0.16
ClpbQ60649 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClpbQ60649 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClpbQ60649 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClpbQ60649 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClpbQ60649 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClpbQ60649 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ClpbQ60649 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ClpbQ60649 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
ClpbQ60649 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClpbQ60649 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClpbQ60649 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ClpbQ60649 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClpbQ60649 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ClpbQ60649 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
ClpbQ60649 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClpbQ60649 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ClpbQ60649 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClpbQ60649 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClpbQ60649 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClpbQ60649 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClpbQ60649 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ClpbQ60649 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClpbQ60649 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClpbQ60649 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
ClpbQ60649 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ClpbQ60649 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.05□□□□□ -0.16
ClpbQ60649 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.05□□□□□ -0.16
ClpbQ60649 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.05□□□□□ -0.16
ClpbQ60649 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ClpbQ60649 Gm26308-201ENSMUST00000157768 69 ntBASIC14.05□□□□□ -0.16
ClpbQ60649 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.05□□□□□ -0.16
ClpbQ60649 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
ClpbQ60649 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.05□□□□□ -0.16
ClpbQ60649 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClpbQ60649 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.05□□□□□ -0.16
ClpbQ60649 Gm10154-201ENSMUST00000084445 354 ntBASIC14.05□□□□□ -0.16
ClpbQ60649 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.05□□□□□ -0.16
ClpbQ60649 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClpbQ60649 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
ClpbQ60649 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClpbQ60649 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClpbQ60649 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.05□□□□□ -0.16
ClpbQ60649 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClpbQ60649 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ClpbQ60649 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ClpbQ60649 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClpbQ60649 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClpbQ60649 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClpbQ60649 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClpbQ60649 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.05□□□□□ -0.16
ClpbQ60649 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClpbQ60649 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClpbQ60649 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClpbQ60649 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.04□□□□□ -0.16
ClpbQ60649 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
ClpbQ60649 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
ClpbQ60649 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
ClpbQ60649 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
ClpbQ60649 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClpbQ60649 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClpbQ60649 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ClpbQ60649 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClpbQ60649 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.04□□□□□ -0.16
ClpbQ60649 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.04□□□□□ -0.16
ClpbQ60649 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.04□□□□□ -0.16
ClpbQ60649 Mir1895-201ENSMUST00000122615 79 ntBASIC14.04□□□□□ -0.16
ClpbQ60649 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.04□□□□□ -0.16
ClpbQ60649 Gm27494-201ENSMUST00000184735 189 ntBASIC14.04□□□□□ -0.16
ClpbQ60649 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClpbQ60649 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.04□□□□□ -0.16
ClpbQ60649 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.04□□□□□ -0.16
ClpbQ60649 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
ClpbQ60649 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.04□□□□□ -0.16
ClpbQ60649 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ClpbQ60649 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
ClpbQ60649 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClpbQ60649 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
ClpbQ60649 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
ClpbQ60649 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.04□□□□□ -0.16
ClpbQ60649 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClpbQ60649 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClpbQ60649 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClpbQ60649 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.04□□□□□ -0.16
ClpbQ60649 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClpbQ60649 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClpbQ60649 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
ClpbQ60649 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClpbQ60649 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.04□□□□□ -0.16
ClpbQ60649 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms