Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 AC139350.3-201ENSMUST00000226151 420 ntBASIC19■□□□□ 0.63
Scaf1Q5U4C3 AC102291.3-201ENSMUST00000226566 405 ntBASIC19■□□□□ 0.63
Scaf1Q5U4C3 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scaf1Q5U4C3 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scaf1Q5U4C3 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC19■□□□□ 0.63
Scaf1Q5U4C3 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Scaf1Q5U4C3 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC19■□□□□ 0.63
Scaf1Q5U4C3 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scaf1Q5U4C3 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC19■□□□□ 0.63
Scaf1Q5U4C3 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Scaf1Q5U4C3 Gm14780-201ENSMUST00000118387 2737 ntBASIC19■□□□□ 0.63
Scaf1Q5U4C3 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC19■□□□□ 0.63
Scaf1Q5U4C3 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scaf1Q5U4C3 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scaf1Q5U4C3 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Scaf1Q5U4C3 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC19■□□□□ 0.63
Scaf1Q5U4C3 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Scaf1Q5U4C3 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Scaf1Q5U4C3 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scaf1Q5U4C3 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scaf1Q5U4C3 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC18.99■□□□□ 0.63
Scaf1Q5U4C3 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Scaf1Q5U4C3 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scaf1Q5U4C3 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC18.99■□□□□ 0.63
Scaf1Q5U4C3 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC18.99■□□□□ 0.63
Scaf1Q5U4C3 Gm23984-201ENSMUST00000157139 203 ntBASIC18.99■□□□□ 0.63
Scaf1Q5U4C3 Mir6392-201ENSMUST00000184924 108 ntBASIC18.99■□□□□ 0.63
Scaf1Q5U4C3 Gm7558-201ENSMUST00000193221 1165 ntBASIC18.99■□□□□ 0.63
Scaf1Q5U4C3 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC18.99■□□□□ 0.63
Scaf1Q5U4C3 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC18.99■□□□□ 0.63
Scaf1Q5U4C3 AC139580.1-202ENSMUST00000223574 928 ntBASIC18.99■□□□□ 0.63
Scaf1Q5U4C3 AC238811.3-201ENSMUST00000225422 709 ntBASIC18.99■□□□□ 0.63
Scaf1Q5U4C3 AC155729.1-201ENSMUST00000227758 544 ntBASIC18.99■□□□□ 0.63
Scaf1Q5U4C3 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scaf1Q5U4C3 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scaf1Q5U4C3 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Scaf1Q5U4C3 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Scaf1Q5U4C3 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scaf1Q5U4C3 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scaf1Q5U4C3 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Scaf1Q5U4C3 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scaf1Q5U4C3 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Scaf1Q5U4C3 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scaf1Q5U4C3 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Scaf1Q5U4C3 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Scaf1Q5U4C3 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scaf1Q5U4C3 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Scaf1Q5U4C3 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scaf1Q5U4C3 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Scaf1Q5U4C3 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Scaf1Q5U4C3 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Scaf1Q5U4C3 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scaf1Q5U4C3 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC18.98■□□□□ 0.63
Scaf1Q5U4C3 Gm15240-201ENSMUST00000118156 720 ntBASIC18.98■□□□□ 0.63
Scaf1Q5U4C3 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Scaf1Q5U4C3 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Scaf1Q5U4C3 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC18.98■□□□□ 0.63
Scaf1Q5U4C3 Gm9002-201ENSMUST00000178437 499 ntBASIC18.98■□□□□ 0.63
Scaf1Q5U4C3 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Scaf1Q5U4C3 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scaf1Q5U4C3 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC18.98■□□□□ 0.63
Scaf1Q5U4C3 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC18.98■□□□□ 0.63
Scaf1Q5U4C3 Gm9908-201ENSMUST00000211534 448 ntBASIC18.98■□□□□ 0.63
Scaf1Q5U4C3 AC154846.1-201ENSMUST00000226278 862 ntBASIC18.98■□□□□ 0.63
Scaf1Q5U4C3 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scaf1Q5U4C3 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scaf1Q5U4C3 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Scaf1Q5U4C3 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scaf1Q5U4C3 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scaf1Q5U4C3 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scaf1Q5U4C3 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scaf1Q5U4C3 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Scaf1Q5U4C3 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC18.98■□□□□ 0.63
Scaf1Q5U4C3 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Scaf1Q5U4C3 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scaf1Q5U4C3 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scaf1Q5U4C3 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scaf1Q5U4C3 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scaf1Q5U4C3 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scaf1Q5U4C3 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scaf1Q5U4C3 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scaf1Q5U4C3 Gm15806-201ENSMUST00000120696 955 ntBASIC18.97■□□□□ 0.63
Scaf1Q5U4C3 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Scaf1Q5U4C3 Gm27701-201ENSMUST00000184498 110 ntBASIC18.97■□□□□ 0.63
Scaf1Q5U4C3 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC18.97■□□□□ 0.63
Scaf1Q5U4C3 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scaf1Q5U4C3 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC18.97■□□□□ 0.63
Scaf1Q5U4C3 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scaf1Q5U4C3 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scaf1Q5U4C3 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scaf1Q5U4C3 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Scaf1Q5U4C3 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scaf1Q5U4C3 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scaf1Q5U4C3 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scaf1Q5U4C3 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scaf1Q5U4C3 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scaf1Q5U4C3 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Scaf1Q5U4C3 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scaf1Q5U4C3 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scaf1Q5U4C3 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms