Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC11.4□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.4□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC11.4□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC11.4□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC11.4□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC11.4□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.4□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.4□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC11.39□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Gm7506-201ENSMUST00000207758 815 ntBASIC11.39□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC11.38□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC11.38□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms