Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim80Q3V061 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim80Q3V061 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim80Q3V061 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim80Q3V061 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim80Q3V061 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim80Q3V061 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim80Q3V061 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.15■□□□□ 0.02
Trim80Q3V061 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Trim80Q3V061 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim80Q3V061 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim80Q3V061 Gm5264-201ENSMUST00000190584 848 ntBASIC15.15■□□□□ 0.02
Trim80Q3V061 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.15■□□□□ 0.02
Trim80Q3V061 Psmb5-202ENSMUST00000227257 622 ntBASIC15.15■□□□□ 0.02
Trim80Q3V061 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim80Q3V061 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim80Q3V061 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trim80Q3V061 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Trim80Q3V061 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim80Q3V061 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim80Q3V061 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim80Q3V061 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim80Q3V061 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim80Q3V061 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim80Q3V061 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim80Q3V061 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.14■□□□□ 0.01
Trim80Q3V061 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim80Q3V061 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim80Q3V061 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim80Q3V061 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim80Q3V061 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.14■□□□□ 0.01
Trim80Q3V061 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.14■□□□□ 0.01
Trim80Q3V061 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.14■□□□□ 0.01
Trim80Q3V061 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim80Q3V061 Gm25990-201ENSMUST00000102440 86 ntBASIC15.14■□□□□ 0.01
Trim80Q3V061 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.14■□□□□ 0.01
Trim80Q3V061 Gm15467-201ENSMUST00000120582 445 ntBASIC15.14■□□□□ 0.01
Trim80Q3V061 Gm11594-201ENSMUST00000122313 162 ntBASIC15.14■□□□□ 0.01
Trim80Q3V061 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim80Q3V061 Gm4535-201ENSMUST00000182274 558 ntBASIC15.14■□□□□ 0.01
Trim80Q3V061 Gm2756-201ENSMUST00000195851 400 ntBASIC15.14■□□□□ 0.01
Trim80Q3V061 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.14■□□□□ 0.01
Trim80Q3V061 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.14■□□□□ 0.01
Trim80Q3V061 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.14■□□□□ 0.01
Trim80Q3V061 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim80Q3V061 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim80Q3V061 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim80Q3V061 Gm10355-201ENSMUST00000097146 517 ntBASIC15.14■□□□□ 0.01
Trim80Q3V061 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trim80Q3V061 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Trim80Q3V061 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim80Q3V061 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Trim80Q3V061 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trim80Q3V061 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim80Q3V061 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim80Q3V061 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim80Q3V061 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim80Q3V061 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim80Q3V061 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim80Q3V061 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim80Q3V061 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim80Q3V061 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim80Q3V061 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC15.13■□□□□ 0.01
Trim80Q3V061 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim80Q3V061 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim80Q3V061 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.13■□□□□ 0.01
Trim80Q3V061 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.13■□□□□ 0.01
Trim80Q3V061 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
Trim80Q3V061 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trim80Q3V061 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
Trim80Q3V061 Gm45003-201ENSMUST00000205875 2158 ntBASIC15.13■□□□□ 0.01
Trim80Q3V061 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.13■□□□□ 0.01
Trim80Q3V061 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trim80Q3V061 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim80Q3V061 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim80Q3V061 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim80Q3V061 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim80Q3V061 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim80Q3V061 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim80Q3V061 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim80Q3V061 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trim80Q3V061 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim80Q3V061 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim80Q3V061 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Trim80Q3V061 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim80Q3V061 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim80Q3V061 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim80Q3V061 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim80Q3V061 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim80Q3V061 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trim80Q3V061 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.12■□□□□ 0.01
Trim80Q3V061 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim80Q3V061 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim80Q3V061 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trim80Q3V061 Carlr-201ENSMUST00000181515 2574 ntBASIC15.12■□□□□ 0.01
Trim80Q3V061 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim80Q3V061 Matn2-206ENSMUST00000228570 2798 ntBASIC15.12■□□□□ 0.01
Trim80Q3V061 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim80Q3V061 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim80Q3V061 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms