Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Sf3b2Q3UJB0 Gm5187-201ENSMUST00000117317 991 ntBASIC18.78■□□□□ 0.6
Sf3b2Q3UJB0 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sf3b2Q3UJB0 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC18.78■□□□□ 0.6
Sf3b2Q3UJB0 Gm15429-201ENSMUST00000151268 798 ntBASIC18.78■□□□□ 0.6
Sf3b2Q3UJB0 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Sf3b2Q3UJB0 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC18.78■□□□□ 0.6
Sf3b2Q3UJB0 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC18.78■□□□□ 0.6
Sf3b2Q3UJB0 Gm21470-201ENSMUST00000187680 696 ntBASIC18.78■□□□□ 0.6
Sf3b2Q3UJB0 Gm38241-201ENSMUST00000192641 898 ntBASIC18.78■□□□□ 0.6
Sf3b2Q3UJB0 Olfr286-202ENSMUST00000205305 969 ntBASIC18.78■□□□□ 0.6
Sf3b2Q3UJB0 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC18.78■□□□□ 0.6
Sf3b2Q3UJB0 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sf3b2Q3UJB0 Gm6013-201ENSMUST00000212264 699 ntBASIC18.78■□□□□ 0.6
Sf3b2Q3UJB0 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Sf3b2Q3UJB0 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sf3b2Q3UJB0 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sf3b2Q3UJB0 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3b2Q3UJB0 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3b2Q3UJB0 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC18.77■□□□□ 0.6
Sf3b2Q3UJB0 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3b2Q3UJB0 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3b2Q3UJB0 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3b2Q3UJB0 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Sf3b2Q3UJB0 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3b2Q3UJB0 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3b2Q3UJB0 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3b2Q3UJB0 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3b2Q3UJB0 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3b2Q3UJB0 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3b2Q3UJB0 Gm12928-201ENSMUST00000117115 573 ntBASIC18.77■□□□□ 0.6
Sf3b2Q3UJB0 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC18.77■□□□□ 0.6
Sf3b2Q3UJB0 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3b2Q3UJB0 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC18.77■□□□□ 0.6
Sf3b2Q3UJB0 AC154806.6-201ENSMUST00000228192 202 ntBASIC18.77■□□□□ 0.6
Sf3b2Q3UJB0 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3b2Q3UJB0 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3b2Q3UJB0 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC18.77■□□□□ 0.6
Sf3b2Q3UJB0 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3b2Q3UJB0 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3b2Q3UJB0 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Sf3b2Q3UJB0 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3b2Q3UJB0 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3b2Q3UJB0 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3b2Q3UJB0 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sf3b2Q3UJB0 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sf3b2Q3UJB0 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sf3b2Q3UJB0 Gm8775-201ENSMUST00000170943 1327 ntBASIC18.76■□□□□ 0.59
Sf3b2Q3UJB0 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3b2Q3UJB0 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3b2Q3UJB0 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3b2Q3UJB0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Sf3b2Q3UJB0 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3b2Q3UJB0 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3b2Q3UJB0 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Sf3b2Q3UJB0 Gm15236-201ENSMUST00000117309 379 ntBASIC18.76■□□□□ 0.59
Sf3b2Q3UJB0 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3b2Q3UJB0 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC18.76■□□□□ 0.59
Sf3b2Q3UJB0 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3b2Q3UJB0 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
Sf3b2Q3UJB0 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3b2Q3UJB0 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3b2Q3UJB0 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3b2Q3UJB0 Gm18753-201ENSMUST00000201000 566 ntBASIC18.76■□□□□ 0.59
Sf3b2Q3UJB0 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC18.76■□□□□ 0.59
Sf3b2Q3UJB0 Gm40466-201ENSMUST00000212174 422 ntBASIC18.76■□□□□ 0.59
Sf3b2Q3UJB0 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3b2Q3UJB0 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3b2Q3UJB0 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3b2Q3UJB0 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3b2Q3UJB0 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3b2Q3UJB0 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3b2Q3UJB0 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3b2Q3UJB0 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Sf3b2Q3UJB0 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.76■□□□□ 0.59
Sf3b2Q3UJB0 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Sf3b2Q3UJB0 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3b2Q3UJB0 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3b2Q3UJB0 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3b2Q3UJB0 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Sf3b2Q3UJB0 Dctn4-202ENSMUST00000223590 1530 ntBASIC18.75■□□□□ 0.59
Sf3b2Q3UJB0 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Sf3b2Q3UJB0 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Sf3b2Q3UJB0 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3b2Q3UJB0 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3b2Q3UJB0 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3b2Q3UJB0 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Sf3b2Q3UJB0 Gm14723-201ENSMUST00000118686 215 ntBASIC18.75■□□□□ 0.59
Sf3b2Q3UJB0 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC18.75■□□□□ 0.59
Sf3b2Q3UJB0 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Sf3b2Q3UJB0 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC18.75■□□□□ 0.59
Sf3b2Q3UJB0 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3b2Q3UJB0 Gm6283-201ENSMUST00000182369 1000 ntBASIC18.75■□□□□ 0.59
Sf3b2Q3UJB0 Gm18056-201ENSMUST00000207670 568 ntBASIC18.75■□□□□ 0.59
Sf3b2Q3UJB0 Gm18061-201ENSMUST00000208350 562 ntBASIC18.75■□□□□ 0.59
Sf3b2Q3UJB0 Gm18063-201ENSMUST00000208529 568 ntBASIC18.75■□□□□ 0.59
Sf3b2Q3UJB0 Gm18052-201ENSMUST00000208750 559 ntBASIC18.75■□□□□ 0.59
Sf3b2Q3UJB0 AC154276.1-201ENSMUST00000228874 1299 ntBASIC18.75■□□□□ 0.59
Sf3b2Q3UJB0 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3b2Q3UJB0 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms