Protein–RNA interactions for Protein: Q3TYX8

Rufy4, RUN and FYVE domain-containing protein 4, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rufy4Q3TYX8 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rufy4Q3TYX8 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rufy4Q3TYX8 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rufy4Q3TYX8 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rufy4Q3TYX8 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rufy4Q3TYX8 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.1■□□□□ 0.17
Rufy4Q3TYX8 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rufy4Q3TYX8 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rufy4Q3TYX8 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rufy4Q3TYX8 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rufy4Q3TYX8 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rufy4Q3TYX8 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rufy4Q3TYX8 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.09■□□□□ 0.17
Rufy4Q3TYX8 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rufy4Q3TYX8 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.09■□□□□ 0.17
Rufy4Q3TYX8 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rufy4Q3TYX8 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rufy4Q3TYX8 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rufy4Q3TYX8 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rufy4Q3TYX8 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC16.09■□□□□ 0.17
Rufy4Q3TYX8 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Rufy4Q3TYX8 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rufy4Q3TYX8 Gm8410-201ENSMUST00000117225 605 ntBASIC16.09■□□□□ 0.17
Rufy4Q3TYX8 Gm12151-201ENSMUST00000121374 290 ntBASIC16.09■□□□□ 0.17
Rufy4Q3TYX8 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC16.09■□□□□ 0.17
Rufy4Q3TYX8 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rufy4Q3TYX8 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.09■□□□□ 0.17
Rufy4Q3TYX8 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rufy4Q3TYX8 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rufy4Q3TYX8 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rufy4Q3TYX8 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rufy4Q3TYX8 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rufy4Q3TYX8 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
Rufy4Q3TYX8 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rufy4Q3TYX8 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rufy4Q3TYX8 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rufy4Q3TYX8 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
Rufy4Q3TYX8 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rufy4Q3TYX8 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rufy4Q3TYX8 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rufy4Q3TYX8 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Rufy4Q3TYX8 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rufy4Q3TYX8 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rufy4Q3TYX8 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rufy4Q3TYX8 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rufy4Q3TYX8 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rufy4Q3TYX8 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rufy4Q3TYX8 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rufy4Q3TYX8 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rufy4Q3TYX8 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rufy4Q3TYX8 Mir7023-201ENSMUST00000185093 64 ntBASIC16.08■□□□□ 0.16
Rufy4Q3TYX8 Gm17837-201ENSMUST00000186435 985 ntBASIC16.08■□□□□ 0.16
Rufy4Q3TYX8 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rufy4Q3TYX8 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC16.08■□□□□ 0.16
Rufy4Q3TYX8 Gm6888-201ENSMUST00000221983 706 ntBASIC16.08■□□□□ 0.16
Rufy4Q3TYX8 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rufy4Q3TYX8 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rufy4Q3TYX8 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rufy4Q3TYX8 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.08■□□□□ 0.16
Rufy4Q3TYX8 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rufy4Q3TYX8 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rufy4Q3TYX8 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Rufy4Q3TYX8 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rufy4Q3TYX8 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rufy4Q3TYX8 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rufy4Q3TYX8 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rufy4Q3TYX8 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rufy4Q3TYX8 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rufy4Q3TYX8 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Rufy4Q3TYX8 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Rufy4Q3TYX8 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rufy4Q3TYX8 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Rufy4Q3TYX8 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Rufy4Q3TYX8 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rufy4Q3TYX8 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rufy4Q3TYX8 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC16.07■□□□□ 0.16
Rufy4Q3TYX8 Gm6539-201ENSMUST00000119157 1064 ntBASIC16.07■□□□□ 0.16
Rufy4Q3TYX8 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rufy4Q3TYX8 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.07■□□□□ 0.16
Rufy4Q3TYX8 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Rufy4Q3TYX8 Gm29310-201ENSMUST00000185468 696 ntBASIC16.07■□□□□ 0.16
Rufy4Q3TYX8 Gm21825-201ENSMUST00000185728 696 ntBASIC16.07■□□□□ 0.16
Rufy4Q3TYX8 Gm29109-201ENSMUST00000185895 696 ntBASIC16.07■□□□□ 0.16
Rufy4Q3TYX8 Gm21896-201ENSMUST00000186520 696 ntBASIC16.07■□□□□ 0.16
Rufy4Q3TYX8 Gm21873-201ENSMUST00000186728 696 ntBASIC16.07■□□□□ 0.16
Rufy4Q3TYX8 Gm21794-201ENSMUST00000187056 696 ntBASIC16.07■□□□□ 0.16
Rufy4Q3TYX8 Gm21880-201ENSMUST00000187275 696 ntBASIC16.07■□□□□ 0.16
Rufy4Q3TYX8 Gm21826-201ENSMUST00000187451 696 ntBASIC16.07■□□□□ 0.16
Rufy4Q3TYX8 Gm21198-201ENSMUST00000188393 696 ntBASIC16.07■□□□□ 0.16
Rufy4Q3TYX8 Gm21749-201ENSMUST00000189343 696 ntBASIC16.07■□□□□ 0.16
Rufy4Q3TYX8 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rufy4Q3TYX8 Gm21901-201ENSMUST00000189568 696 ntBASIC16.07■□□□□ 0.16
Rufy4Q3TYX8 Gm29424-201ENSMUST00000189716 696 ntBASIC16.07■□□□□ 0.16
Rufy4Q3TYX8 Gm28599-201ENSMUST00000189838 694 ntBASIC16.07■□□□□ 0.16
Rufy4Q3TYX8 Gm21867-201ENSMUST00000189917 696 ntBASIC16.07■□□□□ 0.16
Rufy4Q3TYX8 Gm29269-201ENSMUST00000190087 696 ntBASIC16.07■□□□□ 0.16
Rufy4Q3TYX8 Gm21722-201ENSMUST00000190153 696 ntBASIC16.07■□□□□ 0.16
Rufy4Q3TYX8 Gm28423-201ENSMUST00000190701 696 ntBASIC16.07■□□□□ 0.16
Rufy4Q3TYX8 Gm21899-201ENSMUST00000190745 696 ntBASIC16.07■□□□□ 0.16
Rufy4Q3TYX8 Gm21910-201ENSMUST00000191163 696 ntBASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms