Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.4□□□□□ -0.1
Q3KNL4 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Q3KNL4 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.4□□□□□ -0.1
Q3KNL4 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.4□□□□□ -0.1
Q3KNL4 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Q3KNL4 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Q3KNL4 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Q3KNL4 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Q3KNL4 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Q3KNL4 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Q3KNL4 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Q3KNL4 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Q3KNL4 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.4□□□□□ -0.1
Q3KNL4 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Q3KNL4 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Q3KNL4 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Q3KNL4 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Q3KNL4 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Q3KNL4 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Q3KNL4 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Q3KNL4 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Q3KNL4 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.4□□□□□ -0.11
Q3KNL4 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.39□□□□□ -0.11
Q3KNL4 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Q3KNL4 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.39□□□□□ -0.11
Q3KNL4 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q3KNL4 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Q3KNL4 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q3KNL4 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q3KNL4 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q3KNL4 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Q3KNL4 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Q3KNL4 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.39□□□□□ -0.11
Q3KNL4 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q3KNL4 Gm7862-201ENSMUST00000121461 292 ntBASIC14.39□□□□□ -0.11
Q3KNL4 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Q3KNL4 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.39□□□□□ -0.11
Q3KNL4 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Q3KNL4 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q3KNL4 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q3KNL4 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q3KNL4 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q3KNL4 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q3KNL4 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q3KNL4 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Q3KNL4 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q3KNL4 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q3KNL4 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q3KNL4 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q3KNL4 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q3KNL4 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q3KNL4 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Q3KNL4 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q3KNL4 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q3KNL4 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q3KNL4 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Q3KNL4 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q3KNL4 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q3KNL4 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q3KNL4 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Q3KNL4 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q3KNL4 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q3KNL4 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q3KNL4 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q3KNL4 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Q3KNL4 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Q3KNL4 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q3KNL4 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q3KNL4 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q3KNL4 Gm12008-201ENSMUST00000117791 755 ntBASIC14.38□□□□□ -0.11
Q3KNL4 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Q3KNL4 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Q3KNL4 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.38□□□□□ -0.11
Q3KNL4 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q3KNL4 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q3KNL4 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q3KNL4 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q3KNL4 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Q3KNL4 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q3KNL4 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.38□□□□□ -0.11
Q3KNL4 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Q3KNL4 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Q3KNL4 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q3KNL4 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q3KNL4 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Q3KNL4 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Q3KNL4 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Q3KNL4 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Q3KNL4 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
Q3KNL4 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Q3KNL4 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Q3KNL4 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Q3KNL4 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q3KNL4 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Q3KNL4 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Q3KNL4 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Q3KNL4 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Q3KNL4 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Q3KNL4 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Q3KNL4 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms