Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.3■□□□□ 0.36
Chrna5Q2MKA5 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chrna5Q2MKA5 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chrna5Q2MKA5 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.3■□□□□ 0.36
Chrna5Q2MKA5 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chrna5Q2MKA5 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Chrna5Q2MKA5 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Chrna5Q2MKA5 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chrna5Q2MKA5 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chrna5Q2MKA5 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chrna5Q2MKA5 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chrna5Q2MKA5 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chrna5Q2MKA5 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chrna5Q2MKA5 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chrna5Q2MKA5 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Chrna5Q2MKA5 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC17.29■□□□□ 0.36
Chrna5Q2MKA5 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chrna5Q2MKA5 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC17.29■□□□□ 0.36
Chrna5Q2MKA5 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC17.29■□□□□ 0.36
Chrna5Q2MKA5 Gm7558-201ENSMUST00000193221 1165 ntBASIC17.29■□□□□ 0.36
Chrna5Q2MKA5 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.29■□□□□ 0.36
Chrna5Q2MKA5 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chrna5Q2MKA5 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Chrna5Q2MKA5 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chrna5Q2MKA5 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Chrna5Q2MKA5 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chrna5Q2MKA5 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chrna5Q2MKA5 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chrna5Q2MKA5 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Chrna5Q2MKA5 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chrna5Q2MKA5 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chrna5Q2MKA5 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.28■□□□□ 0.36
Chrna5Q2MKA5 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chrna5Q2MKA5 Gm12390-201ENSMUST00000117897 397 ntBASIC17.28■□□□□ 0.36
Chrna5Q2MKA5 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chrna5Q2MKA5 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Chrna5Q2MKA5 Gm27839-201ENSMUST00000184242 106 ntBASIC17.28■□□□□ 0.36
Chrna5Q2MKA5 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chrna5Q2MKA5 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC17.28■□□□□ 0.36
Chrna5Q2MKA5 AC153872.1-201ENSMUST00000199539 128 ntBASIC17.28■□□□□ 0.36
Chrna5Q2MKA5 Gm5279-201ENSMUST00000199575 745 ntBASIC17.28■□□□□ 0.36
Chrna5Q2MKA5 Gm7067-201ENSMUST00000207698 1249 ntBASIC17.28■□□□□ 0.36
Chrna5Q2MKA5 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Chrna5Q2MKA5 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chrna5Q2MKA5 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chrna5Q2MKA5 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chrna5Q2MKA5 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chrna5Q2MKA5 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chrna5Q2MKA5 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chrna5Q2MKA5 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chrna5Q2MKA5 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chrna5Q2MKA5 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chrna5Q2MKA5 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chrna5Q2MKA5 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chrna5Q2MKA5 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.28■□□□□ 0.36
Chrna5Q2MKA5 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Chrna5Q2MKA5 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chrna5Q2MKA5 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Chrna5Q2MKA5 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Chrna5Q2MKA5 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chrna5Q2MKA5 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chrna5Q2MKA5 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Chrna5Q2MKA5 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chrna5Q2MKA5 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chrna5Q2MKA5 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chrna5Q2MKA5 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Chrna5Q2MKA5 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC17.27■□□□□ 0.36
Chrna5Q2MKA5 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Chrna5Q2MKA5 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chrna5Q2MKA5 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC17.27■□□□□ 0.35
Chrna5Q2MKA5 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC17.27■□□□□ 0.35
Chrna5Q2MKA5 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chrna5Q2MKA5 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chrna5Q2MKA5 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chrna5Q2MKA5 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chrna5Q2MKA5 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chrna5Q2MKA5 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chrna5Q2MKA5 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Chrna5Q2MKA5 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chrna5Q2MKA5 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chrna5Q2MKA5 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chrna5Q2MKA5 Gm12957-201ENSMUST00000117835 377 ntBASIC17.26■□□□□ 0.35
Chrna5Q2MKA5 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.26■□□□□ 0.35
Chrna5Q2MKA5 Gm10275-202ENSMUST00000168697 495 ntBASIC17.26■□□□□ 0.35
Chrna5Q2MKA5 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Chrna5Q2MKA5 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC17.26■□□□□ 0.35
Chrna5Q2MKA5 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC17.26■□□□□ 0.35
Chrna5Q2MKA5 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC17.26■□□□□ 0.35
Chrna5Q2MKA5 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chrna5Q2MKA5 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chrna5Q2MKA5 Gm10275-201ENSMUST00000092620 635 ntBASIC17.26■□□□□ 0.35
Chrna5Q2MKA5 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chrna5Q2MKA5 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chrna5Q2MKA5 Gm5912-201ENSMUST00000122282 1438 ntBASIC17.26■□□□□ 0.35
Chrna5Q2MKA5 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Chrna5Q2MKA5 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chrna5Q2MKA5 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chrna5Q2MKA5 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Chrna5Q2MKA5 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chrna5Q2MKA5 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms