Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.17□□□□□ -0.14
Ptchd3Q0EEE2 Gm27646-201ENSMUST00000183989 110 ntBASIC14.17□□□□□ -0.14
Ptchd3Q0EEE2 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.17□□□□□ -0.14
Ptchd3Q0EEE2 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.17□□□□□ -0.14
Ptchd3Q0EEE2 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.17□□□□□ -0.14
Ptchd3Q0EEE2 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.17□□□□□ -0.14
Ptchd3Q0EEE2 Gm6296-201ENSMUST00000222599 943 ntBASIC14.17□□□□□ -0.14
Ptchd3Q0EEE2 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ptchd3Q0EEE2 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ptchd3Q0EEE2 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ptchd3Q0EEE2 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ptchd3Q0EEE2 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.17□□□□□ -0.14
Ptchd3Q0EEE2 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ptchd3Q0EEE2 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ptchd3Q0EEE2 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.17□□□□□ -0.14
Ptchd3Q0EEE2 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ptchd3Q0EEE2 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ptchd3Q0EEE2 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ptchd3Q0EEE2 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ptchd3Q0EEE2 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
Ptchd3Q0EEE2 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ptchd3Q0EEE2 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ptchd3Q0EEE2 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ptchd3Q0EEE2 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ptchd3Q0EEE2 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptchd3Q0EEE2 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptchd3Q0EEE2 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptchd3Q0EEE2 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptchd3Q0EEE2 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptchd3Q0EEE2 Gm11452-201ENSMUST00000122376 690 ntBASIC14.16□□□□□ -0.14
Ptchd3Q0EEE2 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.16□□□□□ -0.14
Ptchd3Q0EEE2 Gm6376-201ENSMUST00000209407 580 ntBASIC14.16□□□□□ -0.14
Ptchd3Q0EEE2 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.16□□□□□ -0.14
Ptchd3Q0EEE2 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptchd3Q0EEE2 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptchd3Q0EEE2 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ptchd3Q0EEE2 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptchd3Q0EEE2 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.16□□□□□ -0.14
Ptchd3Q0EEE2 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptchd3Q0EEE2 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptchd3Q0EEE2 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptchd3Q0EEE2 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ptchd3Q0EEE2 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.15□□□□□ -0.14
Ptchd3Q0EEE2 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptchd3Q0EEE2 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptchd3Q0EEE2 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptchd3Q0EEE2 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptchd3Q0EEE2 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ptchd3Q0EEE2 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Ptchd3Q0EEE2 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ptchd3Q0EEE2 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Ptchd3Q0EEE2 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ptchd3Q0EEE2 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptchd3Q0EEE2 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptchd3Q0EEE2 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ptchd3Q0EEE2 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptchd3Q0EEE2 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.15□□□□□ -0.14
Ptchd3Q0EEE2 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Ptchd3Q0EEE2 Gm15358-201ENSMUST00000119249 520 ntBASIC14.15□□□□□ -0.14
Ptchd3Q0EEE2 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ptchd3Q0EEE2 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ptchd3Q0EEE2 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
Ptchd3Q0EEE2 Gm8318-201ENSMUST00000182954 872 ntBASIC14.15□□□□□ -0.14
Ptchd3Q0EEE2 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ptchd3Q0EEE2 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.15□□□□□ -0.14
Ptchd3Q0EEE2 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptchd3Q0EEE2 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Ptchd3Q0EEE2 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ptchd3Q0EEE2 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptchd3Q0EEE2 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptchd3Q0EEE2 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptchd3Q0EEE2 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptchd3Q0EEE2 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptchd3Q0EEE2 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Ptchd3Q0EEE2 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptchd3Q0EEE2 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptchd3Q0EEE2 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Ptchd3Q0EEE2 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ptchd3Q0EEE2 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ptchd3Q0EEE2 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ptchd3Q0EEE2 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ptchd3Q0EEE2 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ptchd3Q0EEE2 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ptchd3Q0EEE2 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ptchd3Q0EEE2 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ptchd3Q0EEE2 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ptchd3Q0EEE2 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ptchd3Q0EEE2 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.14□□□□□ -0.15
Ptchd3Q0EEE2 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ptchd3Q0EEE2 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Ptchd3Q0EEE2 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ptchd3Q0EEE2 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Ptchd3Q0EEE2 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ptchd3Q0EEE2 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ptchd3Q0EEE2 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.14□□□□□ -0.15
Ptchd3Q0EEE2 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Ptchd3Q0EEE2 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.14□□□□□ -0.15
Ptchd3Q0EEE2 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.14□□□□□ -0.15
Ptchd3Q0EEE2 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ptchd3Q0EEE2 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms