Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hspg2Q05793 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hspg2Q05793 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC10.58□□□□□ -0.72
Hspg2Q05793 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hspg2Q05793 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hspg2Q05793 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hspg2Q05793 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hspg2Q05793 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hspg2Q05793 Gm22902-201ENSMUST00000158488 302 ntBASIC10.58□□□□□ -0.72
Hspg2Q05793 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hspg2Q05793 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hspg2Q05793 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hspg2Q05793 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hspg2Q05793 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hspg2Q05793 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hspg2Q05793 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC10.57□□□□□ -0.72
Hspg2Q05793 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC10.57□□□□□ -0.72
Hspg2Q05793 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Hspg2Q05793 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hspg2Q05793 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Hspg2Q05793 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hspg2Q05793 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hspg2Q05793 Gm11814-201ENSMUST00000119515 929 ntBASIC10.57□□□□□ -0.72
Hspg2Q05793 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC10.57□□□□□ -0.72
Hspg2Q05793 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC10.57□□□□□ -0.72
Hspg2Q05793 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hspg2Q05793 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hspg2Q05793 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hspg2Q05793 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hspg2Q05793 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Hspg2Q05793 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC10.57□□□□□ -0.72
Hspg2Q05793 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hspg2Q05793 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hspg2Q05793 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
Hspg2Q05793 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC10.57□□□□□ -0.72
Hspg2Q05793 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Hspg2Q05793 Gm9823-201ENSMUST00000051212 327 ntBASIC10.57□□□□□ -0.72
Hspg2Q05793 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC10.57□□□□□ -0.72
Hspg2Q05793 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hspg2Q05793 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hspg2Q05793 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hspg2Q05793 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC10.57□□□□□ -0.72
Hspg2Q05793 Gm10156-201ENSMUST00000122364 462 ntBASIC10.57□□□□□ -0.72
Hspg2Q05793 Gm27331-201ENSMUST00000183705 60 ntBASIC10.57□□□□□ -0.72
Hspg2Q05793 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC10.57□□□□□ -0.72
Hspg2Q05793 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hspg2Q05793 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hspg2Q05793 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hspg2Q05793 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC10.56□□□□□ -0.72
Hspg2Q05793 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hspg2Q05793 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC10.56□□□□□ -0.72
Hspg2Q05793 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hspg2Q05793 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Hspg2Q05793 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hspg2Q05793 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC10.56□□□□□ -0.72
Hspg2Q05793 Gm19184-201ENSMUST00000196798 928 ntBASIC10.56□□□□□ -0.72
Hspg2Q05793 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC10.56□□□□□ -0.72
Hspg2Q05793 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC10.56□□□□□ -0.72
Hspg2Q05793 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC10.56□□□□□ -0.72
Hspg2Q05793 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC10.56□□□□□ -0.72
Hspg2Q05793 AC121804.3-201ENSMUST00000223420 295 ntBASIC10.56□□□□□ -0.72
Hspg2Q05793 AC125117.1-201ENSMUST00000228121 468 ntBASIC10.56□□□□□ -0.72
Hspg2Q05793 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hspg2Q05793 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hspg2Q05793 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hspg2Q05793 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC10.56□□□□□ -0.72
Hspg2Q05793 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hspg2Q05793 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hspg2Q05793 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hspg2Q05793 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Hspg2Q05793 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hspg2Q05793 Gm24196-201ENSMUST00000179161 110 ntBASIC10.56□□□□□ -0.72
Hspg2Q05793 Gm19078-201ENSMUST00000206311 727 ntBASIC10.56□□□□□ -0.72
Hspg2Q05793 AC121598.1-201ENSMUST00000228224 1019 ntBASIC10.56□□□□□ -0.72
Hspg2Q05793 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Hspg2Q05793 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hspg2Q05793 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hspg2Q05793 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hspg2Q05793 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hspg2Q05793 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hspg2Q05793 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hspg2Q05793 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hspg2Q05793 AC163637.1-201ENSMUST00000215491 1894 ntBASIC10.56□□□□□ -0.72
Hspg2Q05793 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hspg2Q05793 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Hspg2Q05793 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hspg2Q05793 Gm12585-201ENSMUST00000117307 290 ntBASIC10.56□□□□□ -0.72
Hspg2Q05793 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hspg2Q05793 Gm27243-201ENSMUST00000183964 521 ntBASIC10.56□□□□□ -0.72
Hspg2Q05793 Gm5279-201ENSMUST00000199575 745 ntBASIC10.56□□□□□ -0.72
Hspg2Q05793 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hspg2Q05793 Gm40466-201ENSMUST00000212174 422 ntBASIC10.56□□□□□ -0.72
Hspg2Q05793 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hspg2Q05793 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Hspg2Q05793 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hspg2Q05793 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hspg2Q05793 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hspg2Q05793 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Hspg2Q05793 Gm27501-201ENSMUST00000183599 107 ntBASIC10.55□□□□□ -0.72
Hspg2Q05793 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms