Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC9.77□□□□□ -0.85
PrkdcP97313 Tyms-ps-201ENSMUST00000219550 915 ntBASIC9.77□□□□□ -0.85
PrkdcP97313 Gm14267-206ENSMUST00000226870 1209 ntBASIC9.77□□□□□ -0.85
PrkdcP97313 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
PrkdcP97313 Gm19430-201ENSMUST00000193847 2137 ntBASIC9.77□□□□□ -0.85
PrkdcP97313 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC9.77□□□□□ -0.85
PrkdcP97313 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
PrkdcP97313 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC9.77□□□□□ -0.85
PrkdcP97313 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
PrkdcP97313 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
PrkdcP97313 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
PrkdcP97313 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
PrkdcP97313 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
PrkdcP97313 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
PrkdcP97313 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
PrkdcP97313 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
PrkdcP97313 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PrkdcP97313 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
PrkdcP97313 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
PrkdcP97313 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
PrkdcP97313 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC9.76□□□□□ -0.85
PrkdcP97313 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC9.76□□□□□ -0.85
PrkdcP97313 Ighv1-25-201ENSMUST00000195638 345 ntBASIC9.76□□□□□ -0.85
PrkdcP97313 Gm44126-201ENSMUST00000204831 514 ntBASIC9.76□□□□□ -0.85
PrkdcP97313 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC9.76□□□□□ -0.85
PrkdcP97313 AC122371.3-201ENSMUST00000223402 1061 ntBASIC9.76□□□□□ -0.85
PrkdcP97313 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
PrkdcP97313 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PrkdcP97313 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PrkdcP97313 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PrkdcP97313 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PrkdcP97313 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
PrkdcP97313 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
PrkdcP97313 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC9.76□□□□□ -0.85
PrkdcP97313 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
PrkdcP97313 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PrkdcP97313 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
PrkdcP97313 Gm12485-201ENSMUST00000119641 291 ntBASIC9.76□□□□□ -0.85
PrkdcP97313 Gm16342-201ENSMUST00000124025 1025 ntBASIC9.76□□□□□ -0.85
PrkdcP97313 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
PrkdcP97313 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC9.76□□□□□ -0.85
PrkdcP97313 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
PrkdcP97313 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
PrkdcP97313 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PrkdcP97313 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC9.76□□□□□ -0.85
PrkdcP97313 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC9.76□□□□□ -0.85
PrkdcP97313 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PrkdcP97313 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PrkdcP97313 Gm24990-201ENSMUST00000157406 323 ntBASIC9.76□□□□□ -0.85
PrkdcP97313 Gm9124-201ENSMUST00000191789 1092 ntBASIC9.76□□□□□ -0.85
PrkdcP97313 Gm9113-201ENSMUST00000192510 1018 ntBASIC9.76□□□□□ -0.85
PrkdcP97313 Gm9131-201ENSMUST00000193557 1089 ntBASIC9.76□□□□□ -0.85
PrkdcP97313 Gm9121-201ENSMUST00000193749 1071 ntBASIC9.76□□□□□ -0.85
PrkdcP97313 Gm37497-201ENSMUST00000195830 798 ntBASIC9.76□□□□□ -0.85
PrkdcP97313 Gm18584-201ENSMUST00000203098 964 ntBASIC9.76□□□□□ -0.85
PrkdcP97313 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC9.76□□□□□ -0.85
PrkdcP97313 Gm9826-201ENSMUST00000029124 1299 ntBASIC9.76□□□□□ -0.85
PrkdcP97313 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PrkdcP97313 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC9.76□□□□□ -0.85
PrkdcP97313 Gm10313-201ENSMUST00000095320 1002 ntBASIC9.76□□□□□ -0.85
PrkdcP97313 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PrkdcP97313 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
PrkdcP97313 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PrkdcP97313 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
PrkdcP97313 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
PrkdcP97313 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC9.76□□□□□ -0.85
PrkdcP97313 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC9.76□□□□□ -0.85
PrkdcP97313 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PrkdcP97313 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PrkdcP97313 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC9.75□□□□□ -0.85
PrkdcP97313 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
PrkdcP97313 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
PrkdcP97313 Gm25261-201ENSMUST00000157416 134 ntBASIC9.75□□□□□ -0.85
PrkdcP97313 Gm44551-201ENSMUST00000208804 171 ntBASIC9.75□□□□□ -0.85
PrkdcP97313 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
PrkdcP97313 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
PrkdcP97313 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
PrkdcP97313 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
PrkdcP97313 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
PrkdcP97313 AC161252.3-201ENSMUST00000225465 1549 ntBASIC9.75□□□□□ -0.85
PrkdcP97313 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
PrkdcP97313 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
PrkdcP97313 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC9.75□□□□□ -0.85
PrkdcP97313 Gm2991-201ENSMUST00000173338 480 ntBASIC9.75□□□□□ -0.85
PrkdcP97313 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC9.75□□□□□ -0.85
PrkdcP97313 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
PrkdcP97313 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
PrkdcP97313 Gm45760-201ENSMUST00000212190 1782 ntBASIC9.75□□□□□ -0.85
PrkdcP97313 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
PrkdcP97313 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
PrkdcP97313 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
PrkdcP97313 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
PrkdcP97313 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
PrkdcP97313 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
PrkdcP97313 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
PrkdcP97313 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
PrkdcP97313 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC9.75□□□□□ -0.85
PrkdcP97313 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC9.75□□□□□ -0.85
PrkdcP97313 Gm20426-201ENSMUST00000173657 440 ntBASIC9.75□□□□□ -0.85
PrkdcP97313 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms