Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sf3b6P59708 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sf3b6P59708 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Sf3b6P59708 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.99□□□□□ -0.33
Sf3b6P59708 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sf3b6P59708 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sf3b6P59708 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sf3b6P59708 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sf3b6P59708 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.98□□□□□ -0.33
Sf3b6P59708 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sf3b6P59708 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sf3b6P59708 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sf3b6P59708 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sf3b6P59708 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sf3b6P59708 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Sf3b6P59708 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sf3b6P59708 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sf3b6P59708 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.98□□□□□ -0.33
Sf3b6P59708 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sf3b6P59708 Gm8097-201ENSMUST00000117903 829 ntBASIC12.98□□□□□ -0.33
Sf3b6P59708 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sf3b6P59708 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sf3b6P59708 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Sf3b6P59708 Gm27646-201ENSMUST00000183989 110 ntBASIC12.98□□□□□ -0.33
Sf3b6P59708 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sf3b6P59708 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.98□□□□□ -0.33
Sf3b6P59708 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC12.98□□□□□ -0.33
Sf3b6P59708 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.98□□□□□ -0.33
Sf3b6P59708 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sf3b6P59708 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sf3b6P59708 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sf3b6P59708 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sf3b6P59708 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sf3b6P59708 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Sf3b6P59708 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sf3b6P59708 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.98□□□□□ -0.33
Sf3b6P59708 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sf3b6P59708 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b6P59708 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b6P59708 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.97□□□□□ -0.33
Sf3b6P59708 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b6P59708 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.97□□□□□ -0.33
Sf3b6P59708 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.97□□□□□ -0.33
Sf3b6P59708 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b6P59708 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b6P59708 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Sf3b6P59708 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.97□□□□□ -0.33
Sf3b6P59708 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b6P59708 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.97□□□□□ -0.33
Sf3b6P59708 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Sf3b6P59708 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b6P59708 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Sf3b6P59708 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b6P59708 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Sf3b6P59708 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b6P59708 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b6P59708 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b6P59708 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b6P59708 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b6P59708 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b6P59708 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sf3b6P59708 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.96□□□□□ -0.33
Sf3b6P59708 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sf3b6P59708 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sf3b6P59708 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sf3b6P59708 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sf3b6P59708 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Sf3b6P59708 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sf3b6P59708 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sf3b6P59708 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sf3b6P59708 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sf3b6P59708 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sf3b6P59708 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sf3b6P59708 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.96□□□□□ -0.33
Sf3b6P59708 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Sf3b6P59708 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sf3b6P59708 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Sf3b6P59708 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Sf3b6P59708 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sf3b6P59708 Gm28659-201ENSMUST00000188013 759 ntBASIC12.96□□□□□ -0.33
Sf3b6P59708 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.96□□□□□ -0.33
Sf3b6P59708 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sf3b6P59708 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.96□□□□□ -0.33
Sf3b6P59708 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sf3b6P59708 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Sf3b6P59708 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sf3b6P59708 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Sf3b6P59708 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sf3b6P59708 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sf3b6P59708 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sf3b6P59708 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Sf3b6P59708 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sf3b6P59708 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sf3b6P59708 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Sf3b6P59708 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sf3b6P59708 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sf3b6P59708 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.95□□□□□ -0.34
Sf3b6P59708 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Sf3b6P59708 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sf3b6P59708 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms