Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC11.44□□□□□ -0.58
Ctdsp1P58466 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC11.44□□□□□ -0.58
Ctdsp1P58466 AC159093.1-201ENSMUST00000227779 380 ntBASIC11.44□□□□□ -0.58
Ctdsp1P58466 AC114585.2-202ENSMUST00000228094 426 ntBASIC11.44□□□□□ -0.58
Ctdsp1P58466 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ctdsp1P58466 Gm7729-201ENSMUST00000050143 801 ntBASIC11.44□□□□□ -0.58
Ctdsp1P58466 Gm5874-201ENSMUST00000096101 508 ntBASIC11.44□□□□□ -0.58
Ctdsp1P58466 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ctdsp1P58466 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ctdsp1P58466 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.44□□□□□ -0.58
Ctdsp1P58466 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ctdsp1P58466 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ctdsp1P58466 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ctdsp1P58466 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.44□□□□□ -0.58
Ctdsp1P58466 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ctdsp1P58466 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.44□□□□□ -0.58
Ctdsp1P58466 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ctdsp1P58466 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ctdsp1P58466 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Ctdsp1P58466 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ctdsp1P58466 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.44□□□□□ -0.58
Ctdsp1P58466 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ctdsp1P58466 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ctdsp1P58466 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Ctdsp1P58466 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ctdsp1P58466 Nrn1-203ENSMUST00000223611 1443 ntBASIC11.43□□□□□ -0.58
Ctdsp1P58466 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ctdsp1P58466 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ctdsp1P58466 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Ctdsp1P58466 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ctdsp1P58466 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ctdsp1P58466 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ctdsp1P58466 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ctdsp1P58466 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.43□□□□□ -0.58
Ctdsp1P58466 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ctdsp1P58466 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Ctdsp1P58466 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC11.43□□□□□ -0.58
Ctdsp1P58466 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ctdsp1P58466 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC11.43□□□□□ -0.58
Ctdsp1P58466 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ctdsp1P58466 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC11.43□□□□□ -0.58
Ctdsp1P58466 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC11.43□□□□□ -0.58
Ctdsp1P58466 CT009713.7-201ENSMUST00000224689 571 ntBASIC11.43□□□□□ -0.58
Ctdsp1P58466 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ctdsp1P58466 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ctdsp1P58466 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ctdsp1P58466 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ctdsp1P58466 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ctdsp1P58466 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ctdsp1P58466 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ctdsp1P58466 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ctdsp1P58466 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.43□□□□□ -0.58
Ctdsp1P58466 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Ctdsp1P58466 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.43□□□□□ -0.58
Ctdsp1P58466 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ctdsp1P58466 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ctdsp1P58466 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ctdsp1P58466 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ctdsp1P58466 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ctdsp1P58466 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ctdsp1P58466 AC121801.1-201ENSMUST00000225363 1899 ntBASIC11.42□□□□□ -0.58
Ctdsp1P58466 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ctdsp1P58466 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ctdsp1P58466 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Ctdsp1P58466 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ctdsp1P58466 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ctdsp1P58466 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Ctdsp1P58466 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ctdsp1P58466 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ctdsp1P58466 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ctdsp1P58466 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC11.42□□□□□ -0.58
Ctdsp1P58466 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ctdsp1P58466 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ctdsp1P58466 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ctdsp1P58466 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ctdsp1P58466 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ctdsp1P58466 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC11.42□□□□□ -0.58
Ctdsp1P58466 Gm3807-201ENSMUST00000193520 1168 ntBASIC11.42□□□□□ -0.58
Ctdsp1P58466 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC11.42□□□□□ -0.58
Ctdsp1P58466 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ctdsp1P58466 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ctdsp1P58466 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ctdsp1P58466 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ctdsp1P58466 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ctdsp1P58466 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ctdsp1P58466 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ctdsp1P58466 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ctdsp1P58466 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ctdsp1P58466 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC11.42□□□□□ -0.58
Ctdsp1P58466 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ctdsp1P58466 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ctdsp1P58466 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ctdsp1P58466 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.41□□□□□ -0.58
Ctdsp1P58466 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ctdsp1P58466 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ctdsp1P58466 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.41□□□□□ -0.58
Ctdsp1P58466 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ctdsp1P58466 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ctdsp1P58466 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.41□□□□□ -0.58
Ctdsp1P58466 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms